Gene Information

Name : YpsIP31758_3735 (YpsIP31758_3735)
Accession : YP_001402689.1
Strain : Yersinia pseudotuberculosis IP 31758
Genome accession: NC_009708
Putative virulence/resistance : Virulence
Product : PilM protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4210791 - 4211228 bp
Length : 438 bp
Strand : -
Note : identified by match to protein family HMM PF07419

DNA sequence :
GTGGGCTATGCCATTGCAGTGATGACGATGGTTTTCGTGCTCATCGTCGGCCACGTTCAACTGCGGGAATCCACTGGCTA
TCAGTCGCGGGTTGTGAATCGAACCACAGATCGTTTGGCTGCTGACATGCTGCGATTGGCCAGTGTTGTAAATGATTGGC
GCTACCACCGCACTCTGGATGAAGGGGGACTAAATACTCGCCAGTTTGGCCTCGTTCCCTTACCGGACAGCCGTATCAGC
GCAGCTATACGACGCGGCCGTTTGTGGGTGTGGATACCTGAACAGCAGCAGTTAGTTGACAGCCTTAATCGCCAATCAGC
AAGTTCCGCTCTGGTGGGTACCGTTGCTGGTGGGCGGCTGCGAATGGTTGATGGAACTGACATGAATCTCTCTCTTCCCG
CCGGAGTGGCTGAAGGGAGTATTGTTTATCTTAATTAA

Protein sequence :
MGYAIAVMTMVFVLIVGHVQLRESTGYQSRVVNRTTDRLAADMLRLASVVNDWRYHRTLDEGGLNTRQFGLVPLPDSRIS
AAIRRGRLWVWIPEQQQLVDSLNRQSASSALVGTVAGGRLRMVDGTDMNLSLPAGVAEGSIVYLN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
YpsIP31758_3735 YP_001402689.1 PilM protein Not tested YAPI Protein 1e-62 100
pilM CAF28486.1 putative exported protein Virulence YAPI Protein 1e-62 100
YE3505 YP_001007667.1 putative type IV pilus operon exported poprotein Virulence YAPI Protein 1e-51 80
pilM AAF14813.1 PilM Virulence SPI-7 Protein 2e-18 45
pilM NP_458629.1 putative exported protein Virulence SPI-7 Protein 3e-18 45
pilM NP_807841.1 hypothetical protein Virulence SPI-7 Protein 3e-18 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
YpsIP31758_3735 YP_001402689.1 PilM protein VFG2309 Protein 4e-52 80