Gene Information

Name : YpsIP31758_3733 (YpsIP31758_3733)
Accession : YP_001402687.1
Strain : Yersinia pseudotuberculosis IP 31758
Genome accession: NC_009708
Putative virulence/resistance : Virulence
Product : pilin accessory protein PilO
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4207845 - 4209182 bp
Length : 1338 bp
Strand : -
Note : identified by match to protein family HMM PF06864

DNA sequence :
ATGAACAAGAATATTGCTGCTCGCCCTATCATGCCAGCCCAACAGGTAATGAGAATGGGGCGCTTGGGATGGGTGGCGGG
TATGAACTGGCAGATGCACGATCTGGTCGCCCAAAAAAAACGGTTTTTTAGTCGTGCTGATGGAGCCACTCATCGGCTGA
AATTGTTGGCTAAAGCGCAACAGATTACCGGTCAGGCGCGCCCTCTTGGTGTTCAACCGGGGCTCCGGCTTTGTTCGCTT
GCTGCGGCCTATCTGGCTCGCGAGGGCGGGAGTCATTACGGCATTTATCAACTCGATGCAAAAAATGATAAGTGGCTTTT
TCTGGCAACGACTGGCGGTTTGCCGTCTGTCATGGGCGATATCATCGGAACCTTGAATGAGGTATTGAGCGCTCAACAGC
GGTTTTTAGATTTTAATGCACCTGAATCATCTACTTCACTGACATCTCTTTCACTGACATCTACTGCATTGAATTGTACG
GCGACATCTGAGACACCTGTTTGTTGGCAGACGTTGACGACAGGACTGTCTCGTCAGGCAATTCGTGCAACAACCCTGGG
CCGTCTCCTTTCTGGCCGCACCATCGCGTGTTTTGCTCTACCCGTCTTGCTTGGTTCAACGGCTTTCTGGTACTGGGGAA
ATCAGCTTGATAAGGCTGAAATGGTAGGCAAAGTCGCTCAGGCTAAGGCGTTACTTGAATTGCAAAGCCAGAACGTCACC
GAATCGACCAAAGAAGAGAACCTGCCGCACCCTTGGGCGAGCATCTGGCCAACACCTTATTTTCTCAGTCAGTGCCTTGT
TGTTCGCCAGCGACTGCCCATAACTCTCACTGGCTGGCGGCTTGCTTACGGCGAGTGTGTGAGTGAGGGGATGCGCCTGC
GTTATGTGGCAACGGCTGCCAGTACCATCGCAGATTTCTCCCGTCGGGCTCGGGAATTGCTCGGGCAAGATGCGTATTTT
AACCTGGAGGAAGGGGGCCAAAATGGTGATGTGTTGATCCCTTTTGTTACCACCGATTCTCCATCGTTATGGCGAGATGA
AAAGATCCCTCCGTCAGCCGTACAGTTGATGCAGTTCATTTCACATTTTCAGCGACGAAATATCAGTGTGCTTCTCAATG
AAGTCAAACCACCTCCGGTGGTTCCGGGGCAGGAAAATACGATCCCTTCGCAAGGCTGGCGAGAGTTTACCTTTACTTTC
ACGACAAAATCATCACCAGAAGGGGTGTTAGCCAGCATAGATGATATCGGTCTGCGTCTGACAAGCATCGCGTTTACGCT
CAACCCGCAGAGTCAATTTGAATACACTATCAAGGGGAGCCTGTATGCACAAAATTAA

Protein sequence :
MNKNIAARPIMPAQQVMRMGRLGWVAGMNWQMHDLVAQKKRFFSRADGATHRLKLLAKAQQITGQARPLGVQPGLRLCSL
AAAYLAREGGSHYGIYQLDAKNDKWLFLATTGGLPSVMGDIIGTLNEVLSAQQRFLDFNAPESSTSLTSLSLTSTALNCT
ATSETPVCWQTLTTGLSRQAIRATTLGRLLSGRTIACFALPVLLGSTAFWYWGNQLDKAEMVGKVAQAKALLELQSQNVT
ESTKEENLPHPWASIWPTPYFLSQCLVVRQRLPITLTGWRLAYGECVSEGMRLRYVATAASTIADFSRRARELLGQDAYF
NLEEGGQNGDVLIPFVTTDSPSLWRDEKIPPSAVQLMQFISHFQRRNISVLLNEVKPPPVVPGQENTIPSQGWREFTFTF
TTKSSPEGVLASIDDIGLRLTSIAFTLNPQSQFEYTIKGSLYAQN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
YpsIP31758_3733 YP_001402687.1 pilin accessory protein PilO Virulence YAPI Protein 0.0 100
pilO CAF28488.1 putative fimbrial protein Virulence YAPI Protein 0.0 99
YE3503 YP_001007665.1 putative type IV pilus protein Virulence YAPI Protein 4e-144 69

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
YpsIP31758_3733 YP_001402687.1 pilin accessory protein PilO VFG2311 Protein 1e-144 69