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Name : YpsIP31758_3731 (YpsIP31758_3731) Accession : YP_001402685.1 Strain : Yersinia pseudotuberculosis IP 31758 Genome accession: NC_009708 Putative virulence/resistance : Virulence Product : type IV secretion system protein Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 4205801 - 4207354 bp Length : 1554 bp Strand : - Note : identified by match to protein family HMM PF00437 DNA sequence : ATGATTATTGATAAGGATATCAGGGAGTTTGTCTTTGTTGATCATCTGCCCTGTGGGCAAGTCGTGCTGGTTATTGATAA CAATCGACGCACTGACCCACGGGTACAGCGCTGGGTGGTGGAAATGGCGCGTATTCACACCGGCGCTAAAAACGAGTTTA TGCCCCTCAGTGAATTGAATAACCGCCGCGCCCGTATAGCTGATAGTTCGCAATATAGTATTTGCTTGAAAGACCTGACT AACATCAGCGAGCGGCAGAAAAAAGTGCTGCATTATTTTGAATTGTCGCGCGAGCTTAGGGCTTCAGATATCCATCTCAT CATCGACAGCCAATTGGCTCGGGTAGAAATGCGTTTACATGGTGATCTGGAAGAGGTGGATTCTCTGCCAAGGGGGGAGG GGATGGCGCTGGCTTCAACCATCATTCTCTCGATGTGCGATGTGGCTGAGACACAGTTTTATCCTGGGCGAGAACAGGGT GGGCGCGTAAAATCTGACTTTGCTCGCAAAGTCGGTGTTTTTGGTGCGCGTTATGAGCATCGCCCAACGGCCGACGGCCT TTATGTCGTCATGCGGATTATCGATGATGACGGTGATGCAGTACCGACGTTGAATACGTTAGGATTTATGCCAGAACAGC GCACGCTGGTAGAGAAAATTCTACGTATCCCGGAGGGGATGGTGATCCTCTCTGGCCCTACAGGGGCGGGGAAAAGTACC ACTTTACGTAGCTTCAGCCAGATGTATTTGGATCGCACCGGTGGACGGCGTCGGTTGCTGACGATTGAAGACCCGCCGGA AGGGAGAATCAAAGGCGCGATACAGACGCCCATCATTGCCGATAAAAGCCGTACCGATGTTGTTCAGCAAGCCTGGAATA GCGCCAATGCTTCTGCTTTACGCCTCGATCCTGATGCCATTCTTAACGGCGAAATGCGTGACCTCATCTCTATCGTAGCT GCCGTTTATGCGGCTCAAACGGGCCATTTGCTTCTGACAACGCTTCACGCCAACAGTGCTGTTGGCATTCTCAAACGCAT GGTCGTTTTGGGTGTTTCGGAGGCACTTATCGCGGATGCCCAGCTTATCGTGGGGCTTATCAGCCAGCGCCTTGTTCAAA CGCTGTGTACGTATTGTCGCATTCCCTGGAAAGCCAAGGCCCCGCGACTCACACCTGAAATCCGTATGCGCCTCGAACGT TATTGTTGTGTGGAGGGCGTTTGTCGTCCTGAACAACTGTGGTTTCGTAGTGAGGAAGGATGTGTGCATTGCCAGCAACG GCTTTCTATCAGTGATCGTATCGTCAGCCGCGGTGTGACCGGGCGCAGTGTGGTGGCGGAGGTGATTCGCCCTGATGCGC GATTTATGTCGCTGTATCTGGCTCACGGCCCGGCAGTGGCCAGACAATACTGGGTTAAATCGCTAAGAGGCATAACGCGT GTGACTCATCTGTTACATCAATTGGCTGCGGGTCTGGTTGATCCCCTTGATGCAGATTTGATCTGTCCACTAGATGAAGA TCACCTCTTGACCGGTGAGGTGCCTGATGTCTGA Protein sequence : MIIDKDIREFVFVDHLPCGQVVLVIDNNRRTDPRVQRWVVEMARIHTGAKNEFMPLSELNNRRARIADSSQYSICLKDLT NISERQKKVLHYFELSRELRASDIHLIIDSQLARVEMRLHGDLEEVDSLPRGEGMALASTIILSMCDVAETQFYPGREQG GRVKSDFARKVGVFGARYEHRPTADGLYVVMRIIDDDGDAVPTLNTLGFMPEQRTLVEKILRIPEGMVILSGPTGAGKST TLRSFSQMYLDRTGGRRRLLTIEDPPEGRIKGAIQTPIIADKSRTDVVQQAWNSANASALRLDPDAILNGEMRDLISIVA AVYAAQTGHLLLTTLHANSAVGILKRMVVLGVSEALIADAQLIVGLISQRLVQTLCTYCRIPWKAKAPRLTPEIRMRLER YCCVEGVCRPEQLWFRSEEGCVHCQQRLSISDRIVSRGVTGRSVVAEVIRPDARFMSLYLAHGPAVARQYWVKSLRGITR VTHLLHQLAAGLVDPLDADLICPLDEDHLLTGEVPDV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| YpsIP31758_3731 | YP_001402685.1 | type IV secretion system protein | Virulence | YAPI | Protein | 0.0 | 100 |
| pilQ | CAF28490.1 | putative ATP binding protein | Virulence | YAPI | Protein | 0.0 | 99 |
| YE3502 | YP_001007663.1 | putative type IV pilus protein | Virulence | YAPI | Protein | 0.0 | 91 |
| pilQ | NP_458633.1 | nucleotide-binding protein | Virulence | SPI-7 | Protein | 5e-131 | 56 |
| pilQ | NP_807844.1 | nucleotide-binding protein | Virulence | SPI-7 | Protein | 5e-131 | 56 |
| pilQ | AAF14817.2 | PilQ | Virulence | SPI-7 | Protein | 4e-131 | 56 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| YpsIP31758_3731 | YP_001402685.1 | type IV secretion system protein | VFG2313 | Protein | 0.0 | 91 |
