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Name : pilR (YpsIP31758_3730) Accession : YP_001402684.1 Strain : Yersinia pseudotuberculosis IP 31758 Genome accession: NC_009708 Putative virulence/resistance : Virulence Product : type IV pilus biogenesis protein PilR Function : - COG functional category : N : Cell motility COG ID : COG1459 EC number : - Position : 4204699 - 4205799 bp Length : 1101 bp Strand : - Note : identified by match to protein family HMM PF00482 DNA sequence : ATGATTTTTCGTCCTGCCCGAAATATGTCTTTGGCGAAACGCCTACGGTATGAGTTGGTGCGCCATACTTTTAGTGCTCA TTACCGCCTGGAGTTTTATGACGCATTGCATTTTTTACTGGGAAACGGCCACCCCTTAGGGGCTGCTTTGCGAATGATTG CGGAGGTTCATACCGATTTTGGGAAGCTTTGGCATCCTTATGGCGATTTGGTGGATGACTGTCTGGAGTCGTTATCGGAT AACAGTACGGGACGTATGCTTGAGGACGTGCTTGCCGCTTGGGGGCCATTGGAAGAGGCCGCTTTAATCAGCGCAGGTAT GCGTAGTGGAAAATTGCCAGAAGCACTGCGACAAGCGGGCAAGTTGGTCGAAGCCCGCCGCCGTATTCTGACACTGGTTG GCAAAATGTCCCTTTATCCACTGCTGTTGCTTAGTCTGGGCAGTGGCATGTTGGGCATCAATGGCATGTATTTGATCCCC ACGCTGCGTAAGCTCTCTGATCCAGAAAACTGGCGCGGTGCATTAGGTTTTATGCATGCAGTGGCCAACGTTACGGACAA GCAGAGTACCGTTGCGGTGGGGGTGATTGCCATCTTGGTTGGGCTGGTGCTGTGGTCTATTCCCCGTTGGCGTGGCCGGT TACGCCGCTTTGCTGACAACATAATGCCCTGGTCGGTCTACAAAGATATTCAAGGGGCGGTGTTCCTGATGAATATGGCT GCGCTGCTGAGAGCGAATGTGCAGACGTTAGAGGCGTTGCAGATCTTACTGCCGTTTTCTTCTCCCTGGCTGCAAGAACG GCTTGACGCCATTATCGCCTGTATCGAACAGGGCGACCATCTGGGGAAGGCTTTGCGTAATAGCGGCTACGCATTCCCCA GTAAAGAAGCGGCTAACTATCTCTCCTTGCTGACCGAAGGTGATGGCGCGCCAGATATTATAAGTCGTTACGGTGATCGC TGGTTGGAACAAACGCTGGAGCGAGTCAACAAGCGGGTCATTGGCGTCATGTTTTTCTCTCTGTTACTGATTTTCAGTTT CTTCTTACTCATCTTGTCTATGGTGATGCAAATTCAGGATATGACCAGTGACTCAATGTAA Protein sequence : MIFRPARNMSLAKRLRYELVRHTFSAHYRLEFYDALHFLLGNGHPLGAALRMIAEVHTDFGKLWHPYGDLVDDCLESLSD NSTGRMLEDVLAAWGPLEEAALISAGMRSGKLPEALRQAGKLVEARRRILTLVGKMSLYPLLLLSLGSGMLGINGMYLIP TLRKLSDPENWRGALGFMHAVANVTDKQSTVAVGVIAILVGLVLWSIPRWRGRLRRFADNIMPWSVYKDIQGAVFLMNMA ALLRANVQTLEALQILLPFSSPWLQERLDAIIACIEQGDHLGKALRNSGYAFPSKEAANYLSLLTEGDGAPDIISRYGDR WLEQTLERVNKRVIGVMFFSLLLIFSFFLLILSMVMQIQDMTSDSM |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| pilR | YP_001402684.1 | type IV pilus biogenesis protein PilR | Virulence | YAPI | Protein | 2e-139 | 100 |
| pilR | CAF28491.1 | putative integral inner membrane protein | Virulence | YAPI | Protein | 2e-139 | 99 |
| YE3501 | YP_001007662.1 | type IV pilus integral membrane protein | Virulence | YAPI | Protein | 8e-121 | 87 |
| pilR | NP_458634.1 | putative membrane protein | Virulence | SPI-7 | Protein | 4e-59 | 50 |
| pilR | NP_807845.1 | hypothetical protein | Virulence | SPI-7 | Protein | 4e-59 | 50 |
| pilR | AAC98886.2 | PilR | Virulence | SPI-7 | Protein | 3e-59 | 50 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| pilR | YP_001402684.1 | type IV pilus biogenesis protein PilR | VFG2314 | Protein | 3e-121 | 87 |
