Gene Information

Name : pilS (YpsIP31758_3729)
Accession : YP_001402683.1
Strain : Yersinia pseudotuberculosis IP 31758
Genome accession: NC_009708
Putative virulence/resistance : Virulence
Product : type IV pilus biogenesis protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4204097 - 4204684 bp
Length : 588 bp
Strand : -
Note : PilS; identified by similarity to SP:P33553

DNA sequence : 
ATGTCATTACCAGTAGCATCCAGAAAACAACCCCATAGTGGCTGGGGTATCCTTGAGAGCGGTGGCGTAGCGCTTGTAGT
CATCGTCGTGATTGCGGTTGTACTAGGCGGTATTTATACGCTGTGGAACCGAAAGGATATCGCCTTGGAGTCTGCCAATG
TGCAGAGCATCATAACGTCAACGCAAGGGCTGCTAAAAGGGCGTAATGGCTACAGTTTTGCCAGTGGGACAACAATGACT
GGCATACTTATTCAGGTCGGTGGCGTACCTAAGAACATGATGACGAAAGGTAATGTTACCGCCAGCACCGCGACGCTATG
GAATACATGGGGTGGGCAGGTTATTGTTGCTCCTGTAACTGCGAACGGTTTTAATCACGGCTTTACCCTGACCTATCAGA
AAGTTCCGCAGAGTGTGTGTATTGCCATAACCACACGCCTCAGTGCTGGTGGCAGTATGTCTGGCATTACCATCAATAGC
ACCGTTTATAGTGATGGAAATATCACTGCCGAAAATGCGGGCACAACCTGTGTGAAGGACACTGGCAGAATCGGGATGAA
TACACTTACCTTCACGGTTAACGGTTGA

Protein sequence : 
MSLPVASRKQPHSGWGILESGGVALVVIVVIAVVLGGIYTLWNRKDIALESANVQSIITSTQGLLKGRNGYSFASGTTMT
GILIQVGGVPKNMMTKGNVTASTATLWNTWGGQVIVAPVTANGFNHGFTLTYQKVPQSVCIAITTRLSAGGSMSGITINS
TVYSDGNITAENAGTTCVKDTGRIGMNTLTFTVNG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pilS YP_001402683.1 type IV pilus biogenesis protein Virulence YAPI Protein 2e-74 100
pilS CAF28492.1 putative major pilin subunit Virulence YAPI Protein 1e-73 99
YE3500 YP_001007661.1 putative type IV prepilin Virulence YAPI Protein 6e-63 83
pilS AAC98887.1 PilS Virulence SPI-7 Protein 5e-33 49
pilS NP_458635.1 prepilin Virulence SPI-7 Protein 8e-33 49
pilS NP_807846.1 prepilin Virulence SPI-7 Protein 8e-33 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
pilS YP_001402683.1 type IV pilus biogenesis protein VFG2315 Protein 2e-63 83