Gene Information

Name : YpsIP31758_3728 (YpsIP31758_3728)
Accession : YP_001402682.1
Strain : Yersinia pseudotuberculosis IP 31758
Genome accession: NC_009708
Putative virulence/resistance : Virulence
Product : type IV prepilin peptidase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4203432 - 4204100 bp
Length : 669 bp
Strand : -
Note : identified by match to protein family HMM PF01478

DNA sequence : 
TTGACCATCATCACGTTGGCACTCCCCTGGTTATTTGTGCTGCTGTTATTTTTGCTGGCGCTGCGGTTACTTGATCCAAT
CACCCGACAAGTCAGTCTGTTCCTCAAACGCCATCATTCTTTATCCGCCTTCAAGCAACAATCAGCCACTCGATTGCGTT
ATCACTGGCTCCATGCAGTAGCAATGACGGTGATTGCGGTGGCTCCGTTCGAGGGGCGGGTGTTCAGCAATATGACCTCA
ATGCTGTTTGTTCCTTTTGTATACCGACTTAGTCTCATTGATCGGCTTTCCGGCTGGTTACCGCAGGAATTTACCTGGAG
TTTCCTGGCCGCAGGACTGCTTGCTGCGGCTGGCAACGATGAGCTTCTTTCACACAGTATGACAGCCATCGCGTTACTCC
TGTTTTGCGGATCGGTTCGGATAGTCTTCGGGTATTACGCACAATCTGAGGTGCTGGGGCTAGGCGATGTCTGGTTTGCT
ACTGCTATTGGAGCTTGGCTGGCTTGGCCTTTAGCGCTGTTGGTACTCTGTGTTGGGCTTTGCGGATTCATATTATGGCA
CTTGATGTCAGGTGATGTGAAAACCGGCGGGCCACTCGGGCCCTGGCTGGGTCATGCCGCACTGCTGGCGATGATAGTCA
AGGTCTATGATCCTTTGCTGATGTGGTAA

Protein sequence : 
MTIITLALPWLFVLLLFLLALRLLDPITRQVSLFLKRHHSLSAFKQQSATRLRYHWLHAVAMTVIAVAPFEGRVFSNMTS
MLFVPFVYRLSLIDRLSGWLPQEFTWSFLAAGLLAAAGNDELLSHSMTAIALLLFCGSVRIVFGYYAQSEVLGLGDVWFA
TAIGAWLAWPLALLVLCVGLCGFILWHLMSGDVKTGGPLGPWLGHAALLAMIVKVYDPLLMW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
YpsIP31758_3728 YP_001402682.1 type IV prepilin peptidase Virulence YAPI Protein 1e-71 100
pilU CAF28493.1 putative cysteine-type peptidase Virulence YAPI Protein 2e-70 98
YE3499 YP_001007660.1 type IV prepilin peptidase Virulence YAPI Protein 2e-53 79

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
YpsIP31758_3728 YP_001402682.1 type IV prepilin peptidase VFG2316 Protein 9e-54 79