Gene Information

Name : YpsIP31758_3701 (YpsIP31758_3701)
Accession : YP_001402655.1
Strain : Yersinia pseudotuberculosis IP 31758
Genome accession: NC_009708
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4176218 - 4177171 bp
Length : 954 bp
Strand : -
Note : identified by match to protein family HMM PF07513

DNA sequence :
ATGACTCTCACGTCTCTGCGCCATCGGCGATTATTACCGCTTATTCTCCTTATCGGTAGCAGCCAGTGTATGGCGAACGT
CAACACCGCAAGCTTGATTATCAGTGCGGCCAGCGCTTCGTGCATCAGTTGGAAAGTGAAAGGAATCTGCTACTGGTTGC
TGTGTACGCCTTTGGGTTGTTCAGTGAAAACCTCCGTCAAAGTTGAGCATTTTATTCCCGAAGCCGTTGTCTCTGCCTAC
AGCGGCCCCGGCGATAATCCCTGGGTGGAGATGGCTGCTGTCAGCAGAGCCGCTAGTGGGGCTGAAAGCGGTATTACGGG
TATGCTGACTGGCGGTGGTCAACAGCAAATGAAGGCACCTGGCTTACGTCAACAGAACCTGCGCTACCATTATGCAGATG
CCTATGGACATCCGGCGACCTCGCTGATGGGGGGCAATATTGCAGGCTATTCCTGCCGTTCAGCCGCCACTCCTTTTGCC
CCTTATTTTGTCAGTGCCCTCGATGCTTTGGTATGGCGCAGTGGTTTGCCTGAATCTCTCTATCCAGAAGCACTCATCCC
CGGGCAACGTGAACTGGGTCGCCAGTCAAACGCCAATATGTGGGGGAATATTTACCCTCGTAGCGGTTTTGTTATTCAGC
AGGATAGCTATAAATCCGCTGCGGTAGTCGCCCAACGGGTTGCCGATATTATTACTCGTCATGGTCAACTGCATGTTTAT
CACCCCCTGGTTGGTCAACCTTCGCCGGGCTATTGGCCGCCTGACCCGGTTCGTGAGAATACCGGTAGCCAGAATCATAA
ATGGCAGCGTCTGGAGCCACAGCTCTCAACGGCCTGCGCTATTTTTCCAGAGGCTAACGGCCCCATTGCTCAGAGCGGTA
ACTATGCCTGGGCACTCTGGCAACCTTACAGTTGCTGTAAGCGGCGTGGGCAAACCTTCCTCTTACATCACTGA

Protein sequence :
MTLTSLRHRRLLPLILLIGSSQCMANVNTASLIISAASASCISWKVKGICYWLLCTPLGCSVKTSVKVEHFIPEAVVSAY
SGPGDNPWVEMAAVSRAASGAESGITGMLTGGGQQQMKAPGLRQQNLRYHYADAYGHPATSLMGGNIAGYSCRSAATPFA
PYFVSALDALVWRSGLPESLYPEALIPGQRELGRQSNANMWGNIYPRSGFVIQQDSYKSAAVVAQRVADIITRHGQLHVY
HPLVGQPSPGYWPPDPVRENTGSQNHKWQRLEPQLSTACAIFPEANGPIAQSGNYAWALWQPYSCCKRRGQTFLLHH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
YpsIP31758_3701 YP_001402655.1 hypothetical protein Not tested YAPI Protein 3e-128 100
api54 CAF28528.1 conserved hypothetical protein Not tested YAPI Protein 5e-127 99
YE3467 YP_001007628.1 hypothetical protein Not tested YAPI Protein 1e-118 92
unnamed AAX39458.1 unknown Not tested Hrp PAI Protein 1e-84 70
STY4576 NP_458661.1 hypothetical protein Not tested SPI-7 Protein 8e-95 67
t4273 NP_807871.1 hypothetical protein Not tested SPI-7 Protein 8e-95 67
PMI2573 YP_002152292.1 hypothetical protein Not tested Not named Protein 2e-78 63
pph89 CAI36130.1 hypothetical protein Not tested PPHGI-1 Protein 3e-72 52
EXA20 ABD94629.1 conserved hypothetical protein Not tested ExoU island A Protein 2e-66 51
ORF SG51 AAN62273.1 hypothetical protein Not tested PAGI-3(SG) Protein 3e-68 50
unnamed ABR13357.1 hypothetical protein Not tested PAGI-5 Protein 5e-66 50
RL017 AAP84144.1 conserved hypothetical protein Not tested PAPI-1 Protein 5e-65 50
ORF C43 AAN62136.1 hypothetical protein Not tested PAGI-2(C) Protein 1e-66 50
Pmu_02990 YP_005176198.1 integrating conjugative element protein, PFL family Not tested ICEPmu1 Protein 2e-61 47