|
Name : YpsIP31758_0339 (YpsIP31758_0339) Accession : YP_001399333.1 Strain : Yersinia pseudotuberculosis IP 31758 Genome accession: NC_009708 Putative virulence/resistance : Unknown Product : VgrG protein Function : - COG functional category : S : Function unknown COG ID : COG3501 EC number : - Position : 397578 - 399776 bp Length : 2199 bp Strand : + Note : identified by match to protein family HMM PF04524; match to protein family HMM PF06715; match to protein family HMM TIGR01646; match to protein family HMM TIGR03361 DNA sequence : ATGTTTGCTCATGATAAAGCTAATAATAATAAAGCCGCGGACAAGACCGGCGCAGTGACGCCGACCCATATCGTCTCGCC GGAGGCCGCCCCAACCGTGAGTGGCGCTCAGATGACCGGGATGGCCGGGGGGATCGGGGATGCGGTGGGCGGCACTGCCG GTAAGCGCATCAGTCAGGCTGCCGAGGTGGCTAAAACCGCCCTGGACGCCAAGGCAAAAGTACTGGACGCGGGTGTTAAA CCGATGAGTGTGGCGGCAAGTGGCGCAGGAGTAGCATTACCGGACAGCGCCGCGGCGGCGCTTACCCGCCTGGTCAAACA GCCCTCCGGCCTGCAATTTACCCTGACGGCGGCCAGTTTACCGCCCCAGACCTTTGCGGTGGTGGATTTCACCCTGAGCG AGATGCTCTCCTCGCCGTTTGTGCTCAATGTCGGGCTGGCGAGTGCCGATCCGGCGGTGGATTTTGCGGCGGTATTGGAT GAAGACGCCACGCTGTTTATCTGGCGCGAAGGGGTACTGCAACGCAGCATCACCGGCATGGTCGCCAGCTTTGAACAGGG CGATACCGGTTTTCATCAGACCCGCTACAGCATGGTGATCCGCCCGGCGCTGTGGCGCACCAGCCTGCGGCGCAATGCCC GCATCTTCCAGCAAGCCTCGGTGGAAGAGATCATCACCACCCTGCTGAAAGAGAACGGCATCAACGATTTTGCTTTTGGT TTTCGCCACCCGCACCCGGTGCGCGAGTTCTGCGTGCAATATCAGGAGTCCGATTTTGATTTTATCCAGCGCCTGACGGC AGAAGAGGGGATTTTCTACTACTTCGAGTTCAGCGCCGGGAAAAATACCGTGGTGTATGCCGATGATGTTGGCTCCCTGC CGAAAGGCGCGTCACTGCCCTATAACCCGAATGTGGCGGCGCAGGCGCAGGAACTGAGTATCACCACCTTCACCCGCAGT GCGCAGGTGCGCCCGGCGATGGTGCAACTGAAAGACTACACCTTTAAAAACCCGAACTGGGCCGCGGCCTTCAGCGAACA GTCGGGAGAACTGCAAAACCAGCGACCGGACTACGAGCATTTTGATTTTCCGGGGCGCTTCAAAGATGCCCAGCACGGGC AGGATTTTACCCGTTACCGGCTGGACGCGCTGCGCAATGACGCCAATCTGGGGCAGGGGGCGAGCAATGATTTTACCCTC CAGCCGGGGCAGTTGTTCAGCCTGTACAACCACCCGCGTGGTGATCTGAACCACGCCTGGCAGTTGCTCGGCATTCAGCA CAGCGGTAAACAGATGCAGGCGCTGGAGCAGGCATCTGGCGATCAGGGCACGGTGCTGTTCAACCACTTCAGTTTTATTC CGCACACCCAGACCTGGCGGCCGACGCCGTTGGCTAAACCGGCGATGGACGGCCCGCAGATCGCCATGGTGGTGGGGCCA CCGGGGGAAGAGATTTACTGCGACGAATACGGCCGTATCCGCCTGCAATTTTTATGGGATCGCTACGGGCAGAGCAATGA CAACAGCTCCTGCTGGATCCGGGTGACCCAGCCGTGGGCGGGCCAGGGCTGGGGCATGCTGGCCATTCCGCGTATTGGTC AGGAAGTGGTGGTGGATTTTCTGCACGGCGATCCGGATCAACCGATTGTCACGGGGCGGACCTATCACGCCAACAACATC CCGCCGGGGTCGTTACCGGCCAGTAAAACCCAGATGGCGTTCCGCTCAAAAACCCACAAAGGGGAAGGCTACAACGAAAT GCGCTTCGAGGATGCCAAAGGCGGCGAAGGGCTGTTTATGCATGCGCAGAAAGATATGAGTACCACGGTAAAAGATAACC AGACGACGACGGTGGAGAAAGGTAATCAAACCGTCACCGTGGAAAAAGGTGACAGGACAGTCACGGTCGCGACCGGAAAT GAAACCACAGATATTACCCAAGGGAGCCTGACCGAGACGATCAAAGTGCGTCGCAGTACCTGCGCGAATTTTATTCAGGT GAAGGCTGAAGGTGATGCGCCTGGTACGCAACTTTATACCGCGACGGAACAGATAAAGTTCGTGGTGGGCAAGAGCAGCA TTACCTTAAATCCGGACTCTATTATTCTGCAATTTTCTGGCTCTACCTCTATTACGCTGAATGCCGCCAATATTGACGCC ATCGCGCCATTGATTAACTTAAATAAAGACAAGGGATAA Protein sequence : MFAHDKANNNKAADKTGAVTPTHIVSPEAAPTVSGAQMTGMAGGIGDAVGGTAGKRISQAAEVAKTALDAKAKVLDAGVK PMSVAASGAGVALPDSAAAALTRLVKQPSGLQFTLTAASLPPQTFAVVDFTLSEMLSSPFVLNVGLASADPAVDFAAVLD EDATLFIWREGVLQRSITGMVASFEQGDTGFHQTRYSMVIRPALWRTSLRRNARIFQQASVEEIITTLLKENGINDFAFG FRHPHPVREFCVQYQESDFDFIQRLTAEEGIFYYFEFSAGKNTVVYADDVGSLPKGASLPYNPNVAAQAQELSITTFTRS AQVRPAMVQLKDYTFKNPNWAAAFSEQSGELQNQRPDYEHFDFPGRFKDAQHGQDFTRYRLDALRNDANLGQGASNDFTL QPGQLFSLYNHPRGDLNHAWQLLGIQHSGKQMQALEQASGDQGTVLFNHFSFIPHTQTWRPTPLAKPAMDGPQIAMVVGP PGEEIYCDEYGRIRLQFLWDRYGQSNDNSSCWIRVTQPWAGQGWGMLAIPRIGQEVVVDFLHGDPDQPIVTGRTYHANNI PPGSLPASKTQMAFRSKTHKGEGYNEMRFEDAKGGEGLFMHAQKDMSTTVKDNQTTTVEKGNQTVTVEKGDRTVTVATGN ETTDITQGSLTETIKVRRSTCANFIQVKAEGDAPGTQLYTATEQIKFVVGKSSITLNPDSIILQFSGSTSITLNAANIDA IAPLINLNKDKG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| vgrG | AAN64196.1 | VgrG | Not tested | macrophage toxin pathogenicity island | Protein | 0.0 | 62 |
| aec15 | YP_851429.1 | hypothetical protein | Not tested | PAI II APEC-O1 | Protein | 3e-132 | 49 |
| aec15 | AAQ96709.1 | Aec15 | Not tested | AGI-1 | Protein | 2e-132 | 49 |
