Gene Information

Name : dksA (YpsIP31758_3338)
Accession : YP_001402295.1
Strain : Yersinia pseudotuberculosis IP 31758
Genome accession: NC_009708
Putative virulence/resistance : Unknown
Product : RNA polymerase-binding transcription factor
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG1734
EC number : -
Position : 3755423 - 3755878 bp
Length : 456 bp
Strand : +
Note : identified by match to protein family HMM PF01258; match to protein family HMM TIGR02420

DNA sequence :
ATGCAAGAAGGGCAAAAACGTAAAACCTCGTCCTTGAGCATTCTCGCCATCGCTGGGGTAGAGCCTTACCAAGAGAAGCC
AGGCGAAGAGTATATGAACGCCGCCCAGCTGTCGCATTTCAAGCTGATTCTTGAAGCATGGCGCAATCAGCTCAGGGATG
AAGTAGATCGTACTGTATCGCATATGCAAGACGAAGCTGCTAACTTCCCTGATCCGGTGGACCGTGCCGCGCAGGAAGAA
GAATTCAGCCTTGAACTTCGTAACCGCGACCGCGAGCGTAAACTGATTAAAAAGATCGAGAAGACGCTGAAAAAAGTTGA
AGATGACGATTTTGGTTTCTGCGAGTCTTGTGGCGTAGAAATTGGTATCCGTCGTCTTGAGGCACGGCCAACTGCAGATT
TGTGCATTGACTGTAAAACCCTGGCCGAAATCCGCGAAAAGCAGATGGCAGGCTAA

Protein sequence :
MQEGQKRKTSSLSILAIAGVEPYQEKPGEEYMNAAQLSHFKLILEAWRNQLRDEVDRTVSHMQDEAANFPDPVDRAAQEE
EFSLELRNRDRERKLIKKIEKTLKKVEDDDFGFCESCGVEIGIRRLEARPTADLCIDCKTLAEIREKQMAG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00314 YP_008207779.1 DnaK suppressor protein Not tested AbaR25 Protein 6e-38 62
BJAB0868_00318 YP_008211644.1 DnaK suppressor protein Not tested AbaR26 Protein 6e-38 62