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Name : YpsIP31758_0326 (YpsIP31758_0326) Accession : YP_001399320.1 Strain : Yersinia pseudotuberculosis IP 31758 Genome accession: NC_009708 Putative virulence/resistance : Unknown Product : lipoprotein Function : - COG functional category : S : Function unknown COG ID : COG3523 EC number : - Position : 377928 - 381461 bp Length : 3534 bp Strand : + Note : identified by match to protein family HMM PF06744; match to protein family HMM PF06761; match to protein family HMM TIGR03348 DNA sequence : ATGAAATTGCCGTTCTTTATACGCATAGCCAAGCCCGCCATTCCTCGCCTTAAAGCGTCAATACCGGTGGTATTGGCGTT GATGGCTTGTGCGGCACTCATTTGGGTATGGATTTACGGACCCGAGTGGCAATTGGGGGAAAATTACCCGTTTGAGACAT TATTGAGCCGTTGGTTGGTCACGGCGGTATTTGTCTTGGTGGCCGTTTGTTGGCTCAGCCTGAAAGTCATGAGGCGAGTA CAACACCTGGAAAAACTCCAACTGCAAACGAAAATTCAGCTCGACGACCCCGTCAGTGCTGATATCGAACAACAAAACCA CTACCTCAATGGCTGGAAGCACCAACTTCAGCGCCATTTGAACACCCCGGAATATCTGTATCACCTGCCCTGGTACATGG TCATTGGTGCGCGCAATAGCGGCAAAAGTACACTGATCAAAGAAGGGTATAAACTGACAGAGATCTCCGCATCCGAGCGG CTCCATGTGGAAGGCGCAGCAGATCTGCGCGTCCGCTGCTGGTTGGGGGAACAAGCGGTTATTATCGATCCTGCGGGGGT GCTGATTGAACAACCTACGACACCGATCGCGGGCAAAGCATCACTCAACAGCCGCTTATGGCAAAGTCTATTATCCTGGC TGATTGAACAGCGCCAGCGTCAGCCGCTAAACGGCATTATTCTCACCGTCGATCTTCATCAGATGATGACCGCGAATAAA GCGCAGCGGGAGACGTACGTCGCTGATATTCATCAACGGCTGCAAGAGATACGGCTGTCTTTGCACAGCCAGGTGCCGCT GTATGTGGTGTTCACCAAAATGGACCTGCTGTACGGCTTCGAGGCCATGTACCAATCGCTGGATAAAGCCGAACGTGAAG CGGTTCTGGGGGTGACGTTCAGCCTCAATGCGGCGGATCCGGACGTGTGGCGGACGGAGTTGAAACAGTTCTGGCAGCAA TGGGTCGCACAACTGAATGGCGCGATGCCGGACATGATGCTGAACAGTGTGGATGCCGGGCAGCGTAGCCAGTTGTTTAG CTTCACTCGCCAGATGCAGGGCCTGCACGATTACGTCGTGCAACTGCTGGAAGGCATTCTGTACCGTGGAGAACATGCCC AGCCGCTGTTACGGGGGGTTTATCTCACGTCTGCCCAGCAACGCGGGCAAATGGACGATATCTTTACCCAATCTGCCGCG GTGCAATATCACCTTGCGCCACAGGCCTTCCCGACCTGGCCGGTCTCGGATACGACGCCGTATTTTACCAAAGCGCTGTT TAATCAGGTGCTGTTGGCCGAACCCAATCTGGCCGGAGAGAACGGTATCTGGCTGCAAAAAACGAGAAAGCGAATGTTCA TTTTCTCGGGGGTGGGTGCCCTGGCCGCGCTGACCTTATGGGGCTACTGGCACTACTATCACCAGCTTAACTACCGGGCT GGCGAAGAGGTATTAACCCAGGCAAAAACCTTCTTATCGATCCCACCGCCAGAAGGCGATGACCGTTATGGCAATCTGCA ACTGCCGCTGCTAAACCCCATCCGTGACGCCACGCTGGCTTACGGTAATTACCATGAACGCAGCCCGTTCCTGGCGGATA TGGGGTTATATCAGGGCAATAATATCGGGCCTTATGTCGAAAGCACTTACTTGCAACTCCTACAGCAACGTTTTGTCCCG GCACTGATGAGCGGGCTGTTGGAACAACTGAACGCCGCACCGAAGGGCAGTGAAGAGAAACTGGAAATTCTGCGGGTGAT GCGGATGTTGGAAGACGGCAGTGGCCGCAATGCCGCGCTGGTTGAACAATATATGAGCCACCGCTGGAGCCAACAATTCA ACGGCCAGCGCGAGTTGCAGGAGCAACTGTCGAGCCACCTGAACTACGCACTGAAACACACCGACTGGCACGGCGCACGG GAAAGTGGCGATCAATATGCGATCAAGAGCTTTGTCCCGTACCTCAGCCCGATCCAGTCAGCGCAGCAAGAGTTGAGTAA ACTCTCGATCTACCAACGGGTGTATCAGAACCTGCGGATCAAAGCACAGGATGCGTTGCCGCCCGCGCTCGATTTGCGCG ATCAGATCGGCGCAAGTTTTGACGACATCTTTGTCTCCGGTAACGATCGCCTGCTGGTGATCCCGCAATTCCTGACCCGT AGCGGCTTACAGAGTTACTTCATCAAACAGAACGATCAACTGGTTGATCTCACGGTGATGGACAGTTGGGTACTTAATCT CACCAAGAACGTCGAATACAGCGAGGCAGACCGCAAAGAGATCCATCGCCAGGTGACCGAACAGTATCTTGGCGATTATA CCGCCACCTGGCGTGCGGCCATGAATAACCTATCGGTCAGTGATTTTGAAGGCTTGCCACAGGCGATCAGCGCCATTGAA CAGGTGATCAGCGGGGAACAACCTTTCCGCCGTGCACTGCAAACGCTGAGTGACAACACCCGCTTGCCGGTTATCTCGGA TCTGATCCCCGCGAAGGAGCAGCAAGAGCTGCTGCAAAAACCCGATTACCTGCTGCTGACCCGCATCAACCGTGAGTTCT CCCCCGAAACGGCGGTGCTGGTGGAGAATGGCGATAAAGGCAGCGTGATCCAAAGTGTTTACCAAAAACTGACCGAGCTA CACCGCTATCTGTTGGCGATCCAAAACTCGCCCGCGCCGGGCAAAGCGGCGTTGAAGGCGGTGCAATTACGTCTGGATCA AAACAACAGTGATCCGATTTTCGAAGTCCAGCAACTGGCTAAAAACCTACCGGAGCCGCTAAACCGCTGGGTGGGCGAAC TGGCAGAGCAAGCCTGGCGGGTGGTGATGATGGAGGCGATCCAGTCACTGGAAGTGGAGTGGAATGAGACGGTGATCAAA CAGTATCAAACCTACCTGGCCGGACGTTATCCCTTCGATCCTCACGCGAAACAGGATGTACCACTCAGTGAGTTTGAACG CTTCTTCGGGCCGAAAGGCACGCTCGATGCATTCTATCAGCAGAACCTGAAACCGTTTGTCGAAAACAACCTGACCGGTG GCAGCGATGGCGAATTGCTGATCCGGCCTGATGTGTTACAGCAACTGGCGCAGGCGCGGAAAATTCGCGACACCTTCTTC TCGGCCCAAAACGGCCTGGGCACACAGTTTGCGATTGAACCGGTGCTGTTAAGTGGCAACAAGCGCCGCAGCGTATTGAA TCTGGATGGGCAATTACTGGATTACGCCCATGGCCGCAGCGGCGTAGTGCATCTGGTTTGGCCAAACTCGATGCGTGCAG GAGTGGAAAGCAAACTGACGTTAGTCCCGGATGAGAGCGGCAAATCACCGCGCACCCTCAGCTTCAGCGGTCCTTGGGCG CAGTTGCGGCTGATCAACGCCGGTGAACTGACCAATGTGGGCACCAACTCCTTCGATGTCCGCTTCAAGGTTGATGGCGG CGAGATGACGTACCGCATCTTTGTTGATGAATCCGACAACCCATTCGCGGGCGGTTTGTTCAGTAAATTCAGTCTGCCAG ACACTTTGTATTAA Protein sequence : MKLPFFIRIAKPAIPRLKASIPVVLALMACAALIWVWIYGPEWQLGENYPFETLLSRWLVTAVFVLVAVCWLSLKVMRRV QHLEKLQLQTKIQLDDPVSADIEQQNHYLNGWKHQLQRHLNTPEYLYHLPWYMVIGARNSGKSTLIKEGYKLTEISASER LHVEGAADLRVRCWLGEQAVIIDPAGVLIEQPTTPIAGKASLNSRLWQSLLSWLIEQRQRQPLNGIILTVDLHQMMTANK AQRETYVADIHQRLQEIRLSLHSQVPLYVVFTKMDLLYGFEAMYQSLDKAEREAVLGVTFSLNAADPDVWRTELKQFWQQ WVAQLNGAMPDMMLNSVDAGQRSQLFSFTRQMQGLHDYVVQLLEGILYRGEHAQPLLRGVYLTSAQQRGQMDDIFTQSAA VQYHLAPQAFPTWPVSDTTPYFTKALFNQVLLAEPNLAGENGIWLQKTRKRMFIFSGVGALAALTLWGYWHYYHQLNYRA GEEVLTQAKTFLSIPPPEGDDRYGNLQLPLLNPIRDATLAYGNYHERSPFLADMGLYQGNNIGPYVESTYLQLLQQRFVP ALMSGLLEQLNAAPKGSEEKLEILRVMRMLEDGSGRNAALVEQYMSHRWSQQFNGQRELQEQLSSHLNYALKHTDWHGAR ESGDQYAIKSFVPYLSPIQSAQQELSKLSIYQRVYQNLRIKAQDALPPALDLRDQIGASFDDIFVSGNDRLLVIPQFLTR SGLQSYFIKQNDQLVDLTVMDSWVLNLTKNVEYSEADRKEIHRQVTEQYLGDYTATWRAAMNNLSVSDFEGLPQAISAIE QVISGEQPFRRALQTLSDNTRLPVISDLIPAKEQQELLQKPDYLLLTRINREFSPETAVLVENGDKGSVIQSVYQKLTEL HRYLLAIQNSPAPGKAALKAVQLRLDQNNSDPIFEVQQLAKNLPEPLNRWVGELAEQAWRVVMMEAIQSLEVEWNETVIK QYQTYLAGRYPFDPHAKQDVPLSEFERFFGPKGTLDAFYQQNLKPFVENNLTGGSDGELLIRPDVLQQLAQARKIRDTFF SAQNGLGTQFAIEPVLLSGNKRRSVLNLDGQLLDYAHGRSGVVHLVWPNSMRAGVESKLTLVPDESGKSPRTLSFSGPWA QLRLINAGELTNVGTNSFDVRFKVDGGEMTYRIFVDESDNPFAGGLFSKFSLPDTLY |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| pmt1 | AAN64194.1 | Pmt1 | Not tested | macrophage toxin pathogenicity island | Protein | 0.0 | 69 |
| aec30 | AAQ96724.1 | Aec30 | Not tested | AGI-1 | Protein | 0.0 | 58 |
| aec30 | YP_851415.1 | hypothetical protein | Not tested | PAI II APEC-O1 | Protein | 0.0 | 58 |
