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Name : clpV2 (YpsIP31758_0322) Accession : YP_001399316.1 Strain : Yersinia pseudotuberculosis IP 31758 Genome accession: NC_009708 Putative virulence/resistance : Virulence Product : type VI secretion ATPase Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 372422 - 375025 bp Length : 2604 bp Strand : + Note : identified by similarity to RF:ZP_00754147.1; match to protein family HMM PF07724; match to protein family HMM PF07728; match to protein family HMM TIGR03345 DNA sequence : ATGATTCAAATTGACTTGCCCACACTCGTAAACCGCCTTAATCCCATTGCCCGCCATTCTCTGGAAGCGGCGGCGGCGCA TTGCGTCAGTCAGCAGGAAGCTGAAATTACGGTCTCCCAAGTGCTACTGCAAATGATCTCCACACCATTATGTGATGTCA GGTTAATCCTGAGCCATGCGGGTGTTGAGGAGGATGAACTACGGGAGTCGCTCGATCAACGTGTTTCAGGCTATCAAGCT ATTACCCAGGCCTACCCGAGTTTTTCCCCATTACTGGTGGAATGGTTACAAGACAGTTGGTTGCTGGCATCGACAGAGAT GGAACACAGCCAACTCCGTAGCGGCGTGATGTTATTGACGTTATTGCTCAGCCCGTCGCGCTATCTGGTTCCCACGGCCA ACCGGCTACTGTCTCCGATTAACCGTGAGTTACTGCGTCAGAATTTTGCTAACTGGACGGCAGACTCAGCAGAAACACCG CGAGCAGAAAAAGGGGCTGAAGCTGGCAACGGCGCAGAAATCAATGGTGACAGCTTGCTGGCCCGCTATGCCAGCAATAT GACCGAACAGGCCCGTAACGGCGAATTAGACCCTGTGCTGTGTCGAGATACCGAAATCGATCTGATGATCGATATTCTGT GCCGCCGCCGCAAAAATAACCCGATAGTGGTGGGTGAAGCGGGGGTAGGGAAAAGTGCGCTGATCGAAGGTTTAGCCCTG CGTATCGTGGATAATCAGGTGCCAGAAAAACTGCGTAACAGCGAGTTGATGACGCTGGATTTAGGCGCGCTTCAGGCTGG TGCGGCAGTGAAAGGCGAATTTGAGAAGCGTTTCAAGGGCATCATGGCGGAAATTGCGCAGTCCACGACGCCAATTATCC TGTTTATTGATGAAGCACACACGCTGATCGGGGCCGGTAACCAACAGGGCGGATTAGACATTTCCAATCTGCTCAAACCC GCTTTAGCGCGTGGTGAACTGAAAACGATTGCGGCAACCACCTGGAGCGAATACAAAAAATACTTTGAAAAAGATGCTGC GCTGTCGCGCCGTTTCCAGTTGGTCAAAGTTTCTGAACCCAGCGCGCAAGAGGCCACGATTATCATGCGTGGCCTACGTA CAGTTTATGAACAGGCGCATGGCGTCCTGATCGATGATGAAGCATTGCAAGCTGCGGCGGTGCTCAGTGACCGCTATATT TCAGGGCGGCAGTTGCCAGATAAAGCCATCGACGTGTTAGATACCGCAGCCGCACGTGTTGCCATCAATCTCACCTCTGC ACCGCGTCAGGTTTCGGCACTGAAAAACGAACTCTACCATCAGGGGATGGAAATCGAGATGCTGGAGCGGGAGCAACGCC TCAGCTTAAGCCGCCCGGATGAGCGGTTATCCGTTTTACAACAGCAGCGAATTGAGATCGAACAGCAACTCATTGCCCTG AATACCGGTTGGGAAAAGCAACAACATTTGGTCCAGCAGATTATCGCACTGAGAGCGGTCCTGTTGGCACAAGAAGAGAG CGCCACAGATGAGCAAGTGGTCAATCTGACAGCGCTGAGCGATGAGTTGGAACGGTTGCAACAGCACCAGACGCTGGTCT CGCCCCATGTGGATAAGAGCCAGATTGCGGCGGTGATCGCGGAATGGACCGGTGTACCGCTAAACCGCCTTTCTCAGAGT GAATTGGCAGTGGTCACTGAATTGCCCTCTTACCTGGGGCAGCAGATCAAAGGGCAAGAGACGGCTATCCATTGCTTGCA CCAACACTTGCTGACCGCAAGGGCGGATTTACGTCGCCCAGGTCGCCCAATGGGGGCTTTCCTGTTGGTTGGGCCTAGCG GCGTGGGTAAAACGGAAACCGTGCTACAGATTGCCGACCTGCTCTATGGCGGCCGCCAATATCTCACCACCATCAATATG TCCGAATTCCAAGAGAAGCATACCGTCTCGCGCCTGATTGGTTCACCTCCGGGCTACGTCGGGTATGGTGAAGGCGGCGT ACTGACCGAAGCCATTCGCCAAAAACCTTACTCGGTAGTGCTACTGGATGAAGTGGAAAAAGCCCACCCCGATGTGCTGA ATCTGTTTTATCAGGCCTTCGATAAGGGCGAGTTGGCGGACGGTGAAGGCCGCATCATTGATTGCAAAAATATCGTATTT TTCCTGACTTCTAATCTGGGATACCAGACCATTGTTGATCATGCAGACGAGCCTGCATTGCTCAATGAACGGCTCTACCC CGAGCTATCGGCATTCTTTAAACCTGCGCTACTGGCTCGCATGGAAGTGGTCCCTTATCTGCCGCTGGGCATGGAAACGC TGCAAATTATCATTCACGGCAAACTGAACCGTCTGGATACGCTGCTGCGCCAACGCTTTAGTGCTGATGTGGTCATTGAA CCTGAAGTGATCGACGAAATCCTGCTACGCGCGACCCGTGCCGAAAATGGTGCGCGTATGCTCGAGTCGATTATCGACGG TGCGCTATTACCACCGGTTTCTCTGTTGTTATTACAGAAAGTGGCCGCCGGCACCGCTATCAGCCACATTCGGATCGCGG TAGAGGGGAATGTGTTTACTGCACAGGTTGAGGGAGCGATATGA Protein sequence : MIQIDLPTLVNRLNPIARHSLEAAAAHCVSQQEAEITVSQVLLQMISTPLCDVRLILSHAGVEEDELRESLDQRVSGYQA ITQAYPSFSPLLVEWLQDSWLLASTEMEHSQLRSGVMLLTLLLSPSRYLVPTANRLLSPINRELLRQNFANWTADSAETP RAEKGAEAGNGAEINGDSLLARYASNMTEQARNGELDPVLCRDTEIDLMIDILCRRRKNNPIVVGEAGVGKSALIEGLAL RIVDNQVPEKLRNSELMTLDLGALQAGAAVKGEFEKRFKGIMAEIAQSTTPIILFIDEAHTLIGAGNQQGGLDISNLLKP ALARGELKTIAATTWSEYKKYFEKDAALSRRFQLVKVSEPSAQEATIIMRGLRTVYEQAHGVLIDDEALQAAAVLSDRYI SGRQLPDKAIDVLDTAAARVAINLTSAPRQVSALKNELYHQGMEIEMLEREQRLSLSRPDERLSVLQQQRIEIEQQLIAL NTGWEKQQHLVQQIIALRAVLLAQEESATDEQVVNLTALSDELERLQQHQTLVSPHVDKSQIAAVIAEWTGVPLNRLSQS ELAVVTELPSYLGQQIKGQETAIHCLHQHLLTARADLRRPGRPMGAFLLVGPSGVGKTETVLQIADLLYGGRQYLTTINM SEFQEKHTVSRLIGSPPGYVGYGEGGVLTEAIRQKPYSVVLLDEVEKAHPDVLNLFYQAFDKGELADGEGRIIDCKNIVF FLTSNLGYQTIVDHADEPALLNERLYPELSAFFKPALLARMEVVPYLPLGMETLQIIIHGKLNRLDTLLRQRFSADVVIE PEVIDEILLRATRAENGARMLESIIDGALLPPVSLLLLQKVAAGTAISHIRIAVEGNVFTAQVEGAI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| aec27 | AAQ96721.1 | Aec27 | Not tested | AGI-1 | Protein | 0.0 | 69 |
| aec27 | YP_851418.1 | ATPase | Not tested | PAI II APEC-O1 | Protein | 0.0 | 69 |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 2e-127 | 47 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpV2 | YP_001399316.1 | type VI secretion ATPase | VFG2084 | Protein | 0.0 | 63 |
