Gene Information

Name : YpsIP31758_0313 (YpsIP31758_0313)
Accession : YP_001399307.1
Strain : Yersinia pseudotuberculosis IP 31758
Genome accession: NC_009708
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : S : Function unknown
COG ID : COG3516
EC number : -
Position : 362943 - 363440 bp
Length : 498 bp
Strand : +
Note : identified by similarity to GB:CAE12667.1; match to protein family HMM PF05591; match to protein family HMM TIGR03358

DNA sequence :
ATGAGTAAAAATAAGCAAAGCAGTGTTGCCCCAAAAGAAAGGATTAACATCAAGTATGTGCCGAATACTGGCGACCAGGT
TGCAGAAATTGAATTACCGCTGAATCTGCTGGTTGTGGGTGATCTTAAAGGCGTGCGTGAAGAGACTTCAATTGAAGAGC
GTCAGGTTGTTTCGGTCAATAAGAATAACTTCAACTCAGTCATGAACGAAGCAAATATCAGTCTGAGTTTCAATGTGCCT
AATCGCCTTGAAGGTGATGGGGAAGAAGACATGCCGGTCGCCTTGTCGATCAAGGGTCTCGATGATTTCTCGCCTGACAA
TGTGGCGAAAAAAGTTCCAGAGCTCAAAAAAATTCTGGAACTACGGGAAGCGTTAGTGGCATTGAAAGGGCCATTGGGGA
ATATCCCGGCTTTCCGCTCTCGTCTACAGGATTTGCTTGGCAATGAAGATATGCGCGAGCAGTTGCTGAAAGAATTGGAC
ATTCTTAATCAAAAATAA

Protein sequence :
MSKNKQSSVAPKERINIKYVPNTGDQVAEIELPLNLLVVGDLKGVREETSIEERQVVSVNKNNFNSVMNEANISLSFNVP
NRLEGDGEEDMPVALSIKGLDDFSPDNVAKKVPELKKILELREALVALKGPLGNIPAFRSRLQDLLGNEDMREQLLKELD
ILNQK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aec17 YP_851427.1 hypothetical protein Not tested PAI II APEC-O1 Protein 7e-37 55
aec17 AAQ96711.1 Aec17 Not tested AGI-1 Protein 5e-37 55
HH0248 NP_859779.1 hypothetical protein Not tested HHGI1 Protein 3e-26 51

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
YpsIP31758_0313 YP_001399307.1 hypothetical protein VFG2092 Protein 1e-40 62
YpsIP31758_0313 YP_001399307.1 hypothetical protein VFG2474 Protein 2e-28 47