|
Name : cyoB (YpsIP31758_3099) Accession : YP_001402059.1 Strain : Yersinia pseudotuberculosis IP 31758 Genome accession: NC_009708 Putative virulence/resistance : Unknown Product : cytochrome O ubiquinol oxidase subunit I Function : - COG functional category : C : Energy production and conversion COG ID : COG0843 EC number : 1.10.3.- Position : 3490901 - 3492892 bp Length : 1992 bp Strand : + Note : identified by match to protein family HMM PF00115; match to protein family HMM TIGR02843 DNA sequence : ATGTTGGGAAAATTAACACTTGATGCGGTTCCATTAGGCGAACCAATCATAATGGTGACCGTTGCCGCAATTATTATTGG AGGAGCGGCACTGGTCGCTGCTCTGACTTATTTCGGCAAGTGGAAATGGCTGTGGAGCGAATGGCTGACTTCGGTTGACC ATAAAAAAATCGGTATCATGTACATTCTGGTTGCCATGGTCATGCTGTTGCGTGGTTTTGCTGATGCCATCATGATGCGT AGTCAGCAAGCGCTTGCTTCTGCGGGCGAAGCGGGTTTCCTACCACCTCACCACTATGATCAGATCTTCACCGCGCACGG CGTTATCATGATTTTCTTCATGGCGATGCCTTTCGTTGTCGGCTTGATGAATATAGTTGTACCGCTACAAATCGGTGCAC GTGACGTTGCCTTCCCGTTCCTAAACTCTCTGAGCTTCTGGCTCTTTGCCGTTGGGGTGGTGTTAATTAACATCTCTCTG GGAGTCGGTGAATTTGCTCAGACTGGCTGGCTAGCTTACCCACCACTATCCGGTATTGAATACAGTCCTGGTGTCGGGGT TGACTACTGGATATGGAGCCTACAGATCTCCGGTCTGGGGACATTGCTAACGGGTGTGAACTTCTTTGCGACTATCCTGA AGATGCGTGCACCTGGCATGTCGATGATGAAAATGCCGGTCTTCACTTGGGCGGCATTTTGTACCAACATCTTGATTATC GTTTCTTTCCCAATCCTGACGGTTACCGTCGCATTACTGACGCTAGATCGTTACCTTGGCACCCATTTCTTTACCAATGA TATGGGTGGCAACATGATGATGTACATCAACCTGATTTGGGCCTGGGGCCATCCGGAAGTGTACATTTTGGTGTTGCCGG TATTCGGGGTCTTCTCCGAAGTTACCGCAACCTTCTCAAGAAAGCGCCTGTTTGGTTACACCTCTCTCGTATGGGCAACC ATCGCGATTACCGTCCTGTCGTTTATTGTTTGGCTACACCACTTCTTTACTATGGGGTCCGGTGCCAACGTTAACGCCTT CTTCGGTATTGCCACGATGATCATTTCCATCCCAACAGGGGTGAAAATTTTCAACTGGTTGTTCACTATGTACCAAGGCC GTATTCAGATTAACTCCGCAATGCTGTGGACTATTGGCTTCATCGTGACCTTCTCTATCGGCGGGATGACCGGGGTTCTG CTGGCCGTGCCGGGTGCAAACTTTGTCCTGCATAACAGCCTGTTCCTGATTGCGCACTTCCATAACGTCATTATCGGTGG TGTAGTATTTGGGTGCTTTGCTGGCCTGACGTACTGGTGGCCTAAATCATTCGGCTTTATGCTGAATGAGAAATGGGGTA TCCGTGCATTCTGGTTCTGGATTATTGGTTTCTTCGTTGCCTTTATGCCGCTGTACGTATTGGGCTTTATGGGAATGACC CGTCGTTTGAGCCAAGACATCAACCCAGAATTCCATACGATGCTCATGGTAGCCGCTGGTGGTGCAGCACTGATTGCTTG CGGTATCTTGTGTCAGGTTATCCAAGTATTCGTCAGTATCCGTGACCGCGAACAAAACCGCGATCTGACCGGTGACCCAT GGGGTGCCCGTACGCTGGAATGGTCGACTTCTTCCCCTCCGCCGTTCTATAACTTCGCCGTCGTTCCTAACGTTGTTGAC CGTGATGAGTTCTGGGACATGAAAGAGAAAGGCGAGGCCTATAAGCGCCCAGCGAAATACGAAGAAATCCACATGCCGAA GAATACCGGTGCAGGTGTGATTATTGCTGGCTTCAGCTTGATTTTCGGCTTTGCTATGGTCTGGTATATCTGGTGGCTAG CCATTATTGGCTTCGTTGGCATGATCGTTACCTGGATCGTGAAAAGCTTCGACGAGGATGTAGATTACTATGTGCCAGCG GCTGAAGTGGAGCGCATCGAAAATCTTCATCATGAACAAATCAGCAAAGCAGGCGTGAATCATGTCAACTGA Protein sequence : MLGKLTLDAVPLGEPIIMVTVAAIIIGGAALVAALTYFGKWKWLWSEWLTSVDHKKIGIMYILVAMVMLLRGFADAIMMR SQQALASAGEAGFLPPHHYDQIFTAHGVIMIFFMAMPFVVGLMNIVVPLQIGARDVAFPFLNSLSFWLFAVGVVLINISL GVGEFAQTGWLAYPPLSGIEYSPGVGVDYWIWSLQISGLGTLLTGVNFFATILKMRAPGMSMMKMPVFTWAAFCTNILII VSFPILTVTVALLTLDRYLGTHFFTNDMGGNMMMYINLIWAWGHPEVYILVLPVFGVFSEVTATFSRKRLFGYTSLVWAT IAITVLSFIVWLHHFFTMGSGANVNAFFGIATMIISIPTGVKIFNWLFTMYQGRIQINSAMLWTIGFIVTFSIGGMTGVL LAVPGANFVLHNSLFLIAHFHNVIIGGVVFGCFAGLTYWWPKSFGFMLNEKWGIRAFWFWIIGFFVAFMPLYVLGFMGMT RRLSQDINPEFHTMLMVAAGGAALIACGILCQVIQVFVSIRDREQNRDLTGDPWGARTLEWSTSSPPPFYNFAVVPNVVD RDEFWDMKEKGEAYKRPAKYEEIHMPKNTGAGVIIAGFSLIFGFAMVWYIWWLAIIGFVGMIVTWIVKSFDEDVDYYVPA AEVERIENLHHEQISKAGVNHVN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cur_1478 | YP_001800872.1 | cytochrome c oxidase subunit I | Not tested | Not named | Protein | 5e-78 | 44 |
