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Name : amt (YpsIP31758_3077) Accession : YP_001402037.1 Strain : Yersinia pseudotuberculosis IP 31758 Genome accession: NC_009708 Putative virulence/resistance : Unknown Product : ammonium transporter Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG0004 EC number : - Position : 3463478 - 3464770 bp Length : 1293 bp Strand : - Note : identified by match to protein family HMM PF00909; match to protein family HMM TIGR00836 DNA sequence : ATGATGAAAAAACTTTTATCCGTGTTGGGCCTGGGTACGGTAGCGCTGTTACCTTCTTGGGCAATGGCGGCGGCACCGGC AGTCGCTGACAAAGCAGATAATGCTTTTATGATGATTTGCACTGCGTTAGTACTGTTTATGACGATACCCGGTATTGCCC TGTTCTACGGTGGCCTGTTGCGCTCCAAAAACGTATTGTCAATGATGACTCAGGTCATGGTGAGTTTTGCGCTGGTATGT GTTTTGTGGATTCTCTACGGCTACAGCCTGGCGTTTAGTGCGGGTAATGCGTTCTTCGGCAGTTTTGATATGGCCATGCT GAAAGGTATTGAGCTGACTAGCCTGAGTGGCTCGTTTTATCAATATATTCATGTCGTGTTCCAAGCCTCATTTGCCTGTA TCACCGTCGCTCTGATTGTGGGTTCATTCGCAGAGCGTATTCGTTTCTCAGCAGTATTAATTTTCGCCGCGCTGTGGTTC ACCTTCTCTTACCTACCAATAGCGCACATGGTATGGGGTGGTGGTTTCCTGGCAATGGACGGAGCGCTGGATTTTGCTGG TGGTACAGTGGTGCACATTAACGCCGCTGTTGCTGGTTTGGTCGGGGCTTATCTGTTGGGTAAACGTGCCGGATTCGGTA AAGAGGCCTTCAAACCCCATAACTTACCGATGGTCTTTACCGGTACGGCGATTCTGTATATTGGCTGGTTTGGCTTCAAT GCCGGTTCAGCCAGTGCTGCGAACGAAATTGCAGCGCTAGCGTTCTTGAATACCGTCGTTGCAACGGCGGGCGCCATCCT CTCGTGGGTATTTGCTGAGTGGGCTTTACGAGGTAAACCTTCGCTGTTGGGGGCATGTTCCGGTTGTATCGCAGGCTTGG TTGCGATTACTCCGGCAGCAGGTACGGTAGGGGTTGGCGGTGCATTGATTATCGGTTTGGTTGGTGGTGTTGCTGGCCTG TGGGGGGTCGTGCTACTGAAAAAATGGCTGCGGGTCGATGATACCTGTGATGTCTTCGGTGTTCATGGTGTGTGTGGCAT CGTCGGTTGTATTCTGACGGGTGTCTTCACCTCGGCATCGCTGGGCGGCACTGGTTATGCTGCTGGCGTAACCATGGGGC ATCAGGTCGGCGTTCAGTTATTCAGTGTTGGTGTGACTGTTGTTTGGTCGGGTGTTGTTGCCTTCGTTGCCTTTAAAATT GCGGGCTTGATTGTGGGCCTACGGGTACCCGAAGAGCAAGAGCGTGAAGGTCTGGATGTTAACAGTCACGGTGAAAACGC ATATAATCAATAA Protein sequence : MMKKLLSVLGLGTVALLPSWAMAAAPAVADKADNAFMMICTALVLFMTIPGIALFYGGLLRSKNVLSMMTQVMVSFALVC VLWILYGYSLAFSAGNAFFGSFDMAMLKGIELTSLSGSFYQYIHVVFQASFACITVALIVGSFAERIRFSAVLIFAALWF TFSYLPIAHMVWGGGFLAMDGALDFAGGTVVHINAAVAGLVGAYLLGKRAGFGKEAFKPHNLPMVFTGTAILYIGWFGFN AGSASAANEIAALAFLNTVVATAGAILSWVFAEWALRGKPSLLGACSGCIAGLVAITPAAGTVGVGGALIIGLVGGVAGL WGVVLLKKWLRVDDTCDVFGVHGVCGIVGCILTGVFTSASLGGTGYAAGVTMGHQVGVQLFSVGVTVVWSGVVAFVAFKI AGLIVGLRVPEEQEREGLDVNSHGENAYNQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00287 | YP_008207752.1 | Ammonia permease | Not tested | AbaR25 | Protein | 1e-44 | 52 |
| BJAB0868_00291 | YP_008211617.1 | Ammonia permease | Not tested | AbaR26 | Protein | 1e-44 | 52 |
