|
Name : rpmJ (YpsIP31758_3070) Accession : YP_001402030.1 Strain : Yersinia pseudotuberculosis IP 31758 Genome accession: NC_009708 Putative virulence/resistance : Unknown Product : 50S ribosomal protein L36 Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0257 EC number : - Position : 3458000 - 3458143 bp Length : 144 bp Strand : + Note : smallest protein in the large subunit; similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc; the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc io DNA sequence : ATGCAAGTATTAAGTTCATTACGTTCGGCAAAGAACCGCCATCCAGACTGCAAGATTGTCCGTCGCCGTGGCCGAGTGTA CGTAATTTGCAAAAGCAACCCTCGCTTTAAAGCGGTTCAGGGAGGAACCCATAAAAAACGCTGA Protein sequence : MQVLSSLRSAKNRHPDCKIVRRRGRVYVICKSNPRFKAVQGGTHKKR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rpmJ | YP_001800879.1 | 50S ribosomal protein L36 | Not tested | Not named | Protein | 4e-05 | 61 |
