Gene Information

Name : YpsIP31758_3020 (YpsIP31758_3020)
Accession : YP_001401980.1
Strain : Yersinia pseudotuberculosis IP 31758
Genome accession: NC_009708
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4181
EC number : -
Position : 3400032 - 3400718 bp
Length : 687 bp
Strand : -
Note : identified by match to protein family HMM PF00005

DNA sequence : 
ATGCCAGCGGAAAACGTTCTTGAAGTTCATCATCTTAATAAGCACGTCGGTCAGGGTGAGCAACAGCTCTCCATCCTTAC
CGGAGTTGAGCTGGTTGTCAAACCTGCCCAGACAATTGCGCTGATTGGCGAGTCGGGTTCAGGCAAATCAACATTATTGG
GGATTCTGGCCGGGCTGGATGATGGCAGCAGCGGTGATGTGAGCTTGCTTGGGCAGTCATTGACCACGATGGATGAAGAA
GGTCGCGCGCTACTCCGGGCGAAAAATGTCGGCTTTGTCTTTCAGTCATTTATGTTGGTTCCTACATTGAACACGCTTGA
AAACGTTCAACTACCGGCATTACTCCGTGGTGAGAGTGATCGCCAAAGCAAAGCGCAAGCTATTGAATTATTGGAGCAAC
TTGGGCTGGGTAAGCGCCTTTACCATCTTCCCGCCCAGCTTTCCGGTGGTGAACAACAGCGGGTTGCACTGGCCAGGGCT
TTCAGTGGGCGGCCAAAAATCTTATTTGCTGATGAGCCAACCGGTAATCTTGACCGGCAGACGGGTGATCGTATCGCTGA
TTTGCTGTTTTCCCTAAACCGGGATTTCGCGACCACGTTGATTCTGGTCACACATGATGAACAACTGGCCGGTCGCTGTC
AGCGTCGGTTGCGCCTGCGGGACGGTAAATTGTGGGAGGAGTCATGA

Protein sequence : 
MPAENVLEVHHLNKHVGQGEQQLSILTGVELVVKPAQTIALIGESGSGKSTLLGILAGLDDGSSGDVSLLGQSLTTMDEE
GRALLRAKNVGFVFQSFMLVPTLNTLENVQLPALLRGESDRQSKAQAIELLEQLGLGKRLYHLPAQLSGGEQQRVALARA
FSGRPKILFADEPTGNLDRQTGDRIADLLFSLNRDFATTLILVTHDEQLAGRCQRRLRLRDGKLWEES

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-30 41
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-30 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 4e-30 41
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-29 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
YpsIP31758_3020 YP_001401980.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 5e-34 45
YpsIP31758_3020 YP_001401980.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 4e-38 43
YpsIP31758_3020 YP_001401980.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 1e-35 41