Gene Information

Name : YpsIP31758_2510 (YpsIP31758_2510)
Accession : YP_001401478.1
Strain : Yersinia pseudotuberculosis IP 31758
Genome accession: NC_009708
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : S : Function unknown
COG ID : COG3517
EC number : -
Position : 2842819 - 2844369 bp
Length : 1551 bp
Strand : -
Note : identified by similarity to GB:AAN81831.1; match to protein family HMM PF05943; match to protein family HMM TIGR03355

DNA sequence :
ATGCTGATGTCTGTACAGGAAAACCGTGCGCAGGGTACTGCGACGACCGTATTAAAGAATAGCCCTGCGGCACAAGGGGT
TTACGCCGCCTTGTTTGAAAAAATCAACCTGAGCCCGGTCTCCTCACTGGCCGGTATCGAGGCGTTCCAGAACAACGATG
CGCTGGCGGAAGCCACCACCGATGAGCGCGTTACCGCCGCCGTCAGTGTCTTTTTAGACCTGCTGAAGCAGTCGGCGAAG
AAAGTAGAAAAACTGGATAAAACCCTGCTGGACGGCCATATTGCCGCACTGGATGACCAAATCAGCCGCCAGTTGGACGC
GGTAATGCACCACCCCGATTTCCAGCGGGTGGAATCGACCTGGCGTGGTGTGAAGTCGCTGATCGATCAGACCGATTTCC
GCCAGAACGTGCGCATCGAGCTGCTGGATATCAGTAAAGATCATCTGGTGCAGGATTTTGAAGATGCCCCAGAAATTTCA
CAAAGCGGTTTATACGCCCAGACCTATATTCAGGAATACGACACCCCCGGCGGTGAACCGATTGCTGCGGCTATCTCCAA
CTACGAGTTTGACCGTGGCCCGCAGGATATCGCCTTATTGCGCAATATCTCCAAGGTAGCCGCGGCGGCCCATATGCCGT
TTATCGGCTCAGTGGGTCCGGCGTTCTTTGGTAAAGAGAACATGGAAGAGGTGGCGGCCATCAAAGATATCGGCAACTAC
TTTGACCGTGCCGAATACATCAAATGGAAAGCTTTCCGCGACTCGGATGATTCCCGCTATATCGGCCTGACCATGCCGCG
CGTACTGGGGCGTTTGCCTTATGGGCCAGACACCGTGCCGGTGCGCAGCTTTAACTACGTAGAGCAGGTGAAAGGGCCGG
ATCATGAGCGTTATCTGTGGACCAACGCTTCGTTTGCCTTTGCTGCCAACATGGTGAAAAGCTTCATTAAAAATGGCTGG
TGTGTGCAGATCCGTGGCCCGCAGGCCGGTGGTGCCGTCACCAACTTACCGATCCACCTGTACGATCTGGGTACCGGTAA
TCAGGTCAAAATTCCGTCAGAAGTGATGATCCCGGAAACCCGCGAGTTCGAGTTTGCCAATCTGGGCTTTATCCCGCTGT
CGTACTACAAAAACCGCGATTACTCGTGCTTCTTCTCGGCCAACTCGGCGCAGAAACCGGCGCTGTATGACACCGCGGAT
GCCACGGCCAACAGCCGCATCAACGCCCGTTTGCCGTATATCTTCCTGCTGTCGCGCATTGCCCATTATCTGAAACTGAT
CCAGCGCGAGAACATCGGCACCACCAAAGATCGCCGTCTGCTGGAGCTGGAGCTGAACAACTGGGTGCGCGGGCTGGTGA
CGGAAATGACTGATCCGGGTGATGATTTGCAGGCGTCCCATCCCCTGCGTGATGCCAAAGTGACGGTCGAAGATATCGAA
GACAACCCCGGCTTCTTCCGCGTCAAGCTGTATGCGGTACCGCATTTCCAGGTGGAAGGGATGGACGTCAATCTGTCATT
GGTTTCCCAAATGCCAAAGGCTAAGGCATAA

Protein sequence :
MLMSVQENRAQGTATTVLKNSPAAQGVYAALFEKINLSPVSSLAGIEAFQNNDALAEATTDERVTAAVSVFLDLLKQSAK
KVEKLDKTLLDGHIAALDDQISRQLDAVMHHPDFQRVESTWRGVKSLIDQTDFRQNVRIELLDISKDHLVQDFEDAPEIS
QSGLYAQTYIQEYDTPGGEPIAAAISNYEFDRGPQDIALLRNISKVAAAAHMPFIGSVGPAFFGKENMEEVAAIKDIGNY
FDRAEYIKWKAFRDSDDSRYIGLTMPRVLGRLPYGPDTVPVRSFNYVEQVKGPDHERYLWTNASFAFAANMVKSFIKNGW
CVQIRGPQAGGAVTNLPIHLYDLGTGNQVKIPSEVMIPETREFEFANLGFIPLSYYKNRDYSCFFSANSAQKPALYDTAD
ATANSRINARLPYIFLLSRIAHYLKLIQRENIGTTKDRRLLELELNNWVRGLVTEMTDPGDDLQASHPLRDAKVTVEDIE
DNPGFFRVKLYAVPHFQVEGMDVNLSLVSQMPKAKA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aec18 YP_851426.1 hypothetical protein Not tested PAI II APEC-O1 Protein 2e-102 44
aec18 AAQ96712.1 Aec18 Not tested AGI-1 Protein 2e-102 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
YpsIP31758_2510 YP_001401478.1 hypothetical protein VFG2475 Protein 6e-113 46
YpsIP31758_2510 YP_001401478.1 hypothetical protein VFG2093 Protein 3e-109 45
YpsIP31758_2510 YP_001401478.1 hypothetical protein VFG2070 Protein 3e-88 42