Gene Information

Name : YpsIP31758_2478 (YpsIP31758_2478)
Accession : YP_001401447.1
Strain : Yersinia pseudotuberculosis IP 31758
Genome accession: NC_009708
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 2799535 - 2800203 bp
Length : 669 bp
Strand : +
Note : identified by match to protein family HMM PF00005

DNA sequence : 
ATGCTACATTTACAGAATGCAAAAAAATATTACACAACAAAAGTCATAAAAACCAGAGTCCTAAATAATATAACGCTTTC
TGTAGAGAAAGGAGAGTTTGTTTCTATCATGGGGCCATCAGGATCAGGTAAATCAACACTACTCAATATTGTCGGCATGT
TTGAATCCTTGGATTCCGGATCGCTTACGTTGGCCGGAAAACATGTTGATAACCTGGGTTACTCTCAACGGATCACATTA
AGGCGCGAATTAATAGGGTATATATTTCAATCATTTAATCTTATCCCACATTTATCAATATTTGATAATGTCGAGTTGCC
GTTGAAATATCGTGGGGTCGCTAAAAAAGACCGTATTGAGCAAGTAAATCAAATTTTGAACCTTTTGGGGATCGATAACC
GAAAAAACCATAAACCCATGCAATTATCAGGTGGTCAACAACAACGTGTGGCCATTGCCAGAGCGATGGTAACTTGTCCC
GCATTAATATTGGCTGATGAGCCTACCGGTAATTTAGACAGTAAGAATGCTCGAGCGGTACTTGAGCAATTAAAAGCAAT
AAACCAGTCAGGGACTACCATCATCATGGTCACACACTCAGATGAAGCGTCAAGTTATAGTAATAGAATACTCAACATGA
AAGATGGGAATATTAACATGAAAAAATAG

Protein sequence : 
MLHLQNAKKYYTTKVIKTRVLNNITLSVEKGEFVSIMGPSGSGKSTLLNIVGMFESLDSGSLTLAGKHVDNLGYSQRITL
RRELIGYIFQSFNLIPHLSIFDNVELPLKYRGVAKKDRIEQVNQILNLLGIDNRKNHKPMQLSGGQQQRVAIARAMVTCP
ALILADEPTGNLDSKNARAVLEQLKAINQSGTTIIMVTHSDEASSYSNRILNMKDGNINMKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-30 44
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 2e-33 43
Spaf_1862 YP_006310627.1 amino acid ABC transporter ATP-binding protein Not tested FWisland_2 Protein 3e-35 41
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-31 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 7e-31 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-31 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
YpsIP31758_2478 YP_001401447.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 1e-44 49
YpsIP31758_2478 YP_001401447.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 2e-37 44
YpsIP31758_2478 YP_001401447.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 1e-40 44
YpsIP31758_2478 YP_001401447.1 ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 4e-41 43