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Name : hpaF (YpsIP31758_2361) Accession : YP_001401330.1 Strain : Yersinia pseudotuberculosis IP 31758 Genome accession: NC_009708 Putative virulence/resistance : Unknown Product : 5-carboxymethyl-2-hydroxymuconate delta-isomerase Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG3232 EC number : 5.3.3.10 Position : 2661025 - 2661423 bp Length : 399 bp Strand : - Note : identified by match to protein family HMM PF02962 DNA sequence : ATGGCGCATTTCTACGCAGAATGTACTGACAACATCCGTGAACAGGCCGAATTACCCGTCTTGTTTTCTAACGTAAATCA AACTCTGGTGAACACGGGTCTTTTCCCATTGGCAGGTATTCGCAGCCGTGCCATTTGGCTGGATACCTGGCAAATGGCGG ATGGACAGCAAGACTACGCTTTTGTCCATATGACGCTAAAAATAGGCTACGGACGCAGTATCGAGCACCGACAGGCGGTC GGAAAGACATTGTTTGCCTTGATTCAAGCGCATTTCGCAGCCCTGATGTCCCAACGTTATCTGGCTTTGTCGTTCGTCAT AGAGGAGCTGGATCCAACGCTTAGCTTTAAACAGAACAATGCTCATACATTGTTCCAACAGGGAACCTCTGCATGTTAG Protein sequence : MAHFYAECTDNIREQAELPVLFSNVNQTLVNTGLFPLAGIRSRAIWLDTWQMADGQQDYAFVHMTLKIGYGRSIEHRQAV GKTLFALIQAHFAALMSQRYLALSFVIEELDPTLSFKQNNAHTLFQQGTSAC |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hpaF | AAO17181.1 | HpaF | Not tested | tcd island | Protein | 7e-47 | 75 |
