|
Name : hpaX (YpsIP31758_2358) Accession : YP_001401327.1 Strain : Yersinia pseudotuberculosis IP 31758 Genome accession: NC_009708 Putative virulence/resistance : Unknown Product : 4-hydroxyphenylacetate permease Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG2271 EC number : - Position : 2658018 - 2659385 bp Length : 1368 bp Strand : - Note : identified by match to protein family HMM PF07690; match to protein family HMM TIGR02332 DNA sequence : ATGAGCGATTCACTGTCTACCGCACCGGGCGTTACCCCGCCGGTCAATAAAAACACACCATTAAGTGCGCAGCAGCAGTC CGTCATTAATAAACTGTTTCGCCGTCTGATCCCGTTCTTATTCTTGTTGTTTGTTTTTGCCTTCCTTGATCGTATCAATA TTGGTTTTGCGGGTTTGACGATGGGGAAGGATTTAGGGCTAAGTGCCACGACCTTTGGTTTAGCGACTACATTATTCTAC GTGACATATATCTTATTCGCGATCCCCAGCAATATCATGTTGGGGATCGTGGGTGCCAGGCGTTGGATTGCGACCATTAT GGTGCTCTGGGGTATCGCCTCTACCGCGACCTTATTTGCCGTCGGCCCCAACAGTTTGTATCTCTTACGAATGATTGTTG GGATCACCGAAGCCGGTTTTTTACCCGGCATTCTGGTGTATTTAACTTATTGGTTTCCGGCCCACTTTCGAGCCAGAGCC AATGCGCTGTTTATGGTGGCGATGCCAGTGACTATGGCGCTCGGCTCTCTGGTTTCCGGCTATATTTTGGCGCTTGATGG TTTTTTGAATATGCGTGGTTGGCAGTGGCTATTTCTGCTGGAAGGCTTTCCATCGGTCTTGCTGGGGGGGGTGGTCTGGT TCTATCTGGACGATACCCCGCAGAAAGCGCGCTGGTTAACGAAAGAAGATAAACAGTGTCTGCAAGAGATGCTGGAGAGT GACCGTTTGCAATTGGCGAAACAGGCGGATTATGGTGCCTTACCACAATCAGGGATGTGGCGGGAAATTTTCACCCCCGT GGTGCTGATGTATACACTGGCTTACTTCTGTTTAACCAATACCCTAAGTGCGGTGAATATTTGGACGCCGCAGATCCTGC AAAGTTTTAATCAGAGCAGCAGCAATATCACTATCGGTCTGCTGGCCGCTATCCCACAAGTTTGTACCATTGCCGGCATG ATCTGGTGGAGTAGACGCTCGGATCGGGTTCAGGAACGCAAAATGCACACGGTTTTGCCGTATCTGTTTGCCGCAGCGGG GTGGGTGCTGGCATCGGCCACACAAAATAGCGTAATCCAGTTGTTAGGGATCATTATGGCCTCGACCGGGTCATTTACGG CGATGGCGATTTTCTGGACTACACCGGATCAATCCATCAGCCTGAGAGCCAGAGCTGTTGGTATTGCAGTGATAAATGCC ACTGGAAATATTGGTTCGGCTGTCAGCCCGGTTTTAATTGGTTGGTTGAAAGACCAGACCGGTAACTTTAATTCCGGGCT GTATTTCGTTGCCGGTTTATTGGTTATCGGGGCTGTTATTTTCTTGATGATTCCAATGAAAAAGGCACCTCCAAAAGCCA TTTTCTAA Protein sequence : MSDSLSTAPGVTPPVNKNTPLSAQQQSVINKLFRRLIPFLFLLFVFAFLDRINIGFAGLTMGKDLGLSATTFGLATTLFY VTYILFAIPSNIMLGIVGARRWIATIMVLWGIASTATLFAVGPNSLYLLRMIVGITEAGFLPGILVYLTYWFPAHFRARA NALFMVAMPVTMALGSLVSGYILALDGFLNMRGWQWLFLLEGFPSVLLGGVVWFYLDDTPQKARWLTKEDKQCLQEMLES DRLQLAKQADYGALPQSGMWREIFTPVVLMYTLAYFCLTNTLSAVNIWTPQILQSFNQSSSNITIGLLAAIPQVCTIAGM IWWSRRSDRVQERKMHTVLPYLFAAAGWVLASATQNSVIQLLGIIMASTGSFTAMAIFWTTPDQSISLRARAVGIAVINA TGNIGSAVSPVLIGWLKDQTGNFNSGLYFVAGLLVIGAVIFLMIPMKKAPPKAIF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hpaX | AAO17186.1 | HpaX | Not tested | tcd island | Protein | 1e-158 | 76 |
