Gene Information

Name : YpsIP31758_2272 (YpsIP31758_2272)
Accession : YP_001401241.1
Strain : Yersinia pseudotuberculosis IP 31758
Genome accession: NC_009708
Putative virulence/resistance : Resistance
Product : amino-acid ABC transporter ATP-binding protein YecC
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG1126
EC number : -
Position : 2579304 - 2580065 bp
Length : 762 bp
Strand : -
Note : identified by match to protein family HMM PF00005

DNA sequence : 
ATGAGTACCATTGATATTAAAAAATTGACCAAGCAGTTTAAGGGTCAACAGGTGCTGCACGGTATCGATCTTGAAGTGAA
TAGCGGTGAAGTGGTGGCGATTATTGGCCCTAGCGGGTCAGGAAAAACCACTTTATTACGTTGTATCAATCTACTGGAGA
TCCCCGATTCAGGGATAATTCGGGTAGGCAATATTGAGATTAATGGCAGCATCCACATCAGCAAGCAGCAACGTCAGGTC
CGTGCCTTGCGGCAACAAGTGGGGTTTGTCTTTCAGGGTTTCAATTTGTTCCCCCATCGCACGGTGCTGGAAAATATCAT
TGAAGGGCCCGTGATTGTTAAGGGTGAAGTGCGGGGTTCGGCAGAAAAGCGCGGCCGTGAGTTGCTGGCAAAGGTAGGAT
TAAGTGGTAAAGAGGATACCTATCCGCGCCGTTTATCTGGTGGGCAACAACAACGGGTCGCAATAGCGCGTGCGTTGGCA
ATGCAGCCTCAGGTTATCCTGTTTGATGAACCTACCTCTGCATTGGATCCCGAGCTGGTGGGTGAAGTACTCAGTACCAT
ACGTGCGTTAGCCGAAGAGAAACGCACAATGGTTATTGTGACCCATGAAATGAGCTTTGCCCGCGATGTGGCAGACAGGG
CTATTTTTATGGACCACGGGCAGATTGTTGAGCAAGGCCCGGCGAAAGCACTGTTTTCCCACCCGCAGCATGACCGTACC
AAACAGTTCCTTGATAAATTCCTGAATAACCCAGACTGCTGA

Protein sequence : 
MSTIDIKKLTKQFKGQQVLHGIDLEVNSGEVVAIIGPSGSGKTTLLRCINLLEIPDSGIIRVGNIEINGSIHISKQQRQV
RALRQQVGFVFQGFNLFPHRTVLENIIEGPVIVKGEVRGSAEKRGRELLAKVGLSGKEDTYPRRLSGGQQQRVAIARALA
MQPQVILFDEPTSALDPELVGEVLSTIRALAEEKRTMVIVTHEMSFARDVADRAIFMDHGQIVEQGPAKALFSHPQHDRT
KQFLDKFLNNPDC

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 8e-28 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 8e-28 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 8e-28 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
YpsIP31758_2272 YP_001401241.1 amino-acid ABC transporter ATP-binding protein YecC NC_012469.1.7686878. Protein 4e-26 41