|
Name : YpsIP31758_2163 (YpsIP31758_2163) Accession : YP_001401136.1 Strain : Yersinia pseudotuberculosis IP 31758 Genome accession: NC_009708 Putative virulence/resistance : Unknown Product : fimbrial protein Function : - COG functional category : N : Cell motility COG ID : COG3539 EC number : - Position : 2487935 - 2488465 bp Length : 531 bp Strand : + Note : identified by match to protein family HMM PF00419 DNA sequence : ATGAAAAAAACTTTAGTGACGTTGATGCTATTTATCCTGCCGGGTATAGCTTTTGCGGAAACCTCGAACAATACCATAAA GTTCCAGGGAGAAGTCGCAGAACAGACCTGTATGGTGGATATCAATGGTACCGCCAACACCCCGGTGGTTCTGCTGCCGA CTGTCTCGACCAGTAACCTTAATCAAGTCAACTCGGTGGCGGGAAAGACCAACTTTACGATCAATCTAACAGGCTGCAAT ATTGCGATTCAAGATACCCAAATCAGCTCTGTTTTTCAGGGGATGAATGTCACGTCTGGCGGAAACCTGGGCAATATTGG CACAGCAAGAAATGTTGCCATTCAATTAATTGATCCCCGTGGCACCCCGATTCGTATGTCTGGTGGCAGTGTGGAAGTTC CGGGAATTACCTTGGCGACTGGCGCAACCTCAGCATCACAGGATCTGTCGGCACAATATATAACGGAAGAAGGCCAGGCA ACCGCAGGCAGTGTTATTGCCTCTGCACAGTATGCGATCACCTACCCCTAA Protein sequence : MKKTLVTLMLFILPGIAFAETSNNTIKFQGEVAEQTCMVDINGTANTPVVLLPTVSTSNLNQVNSVAGKTNFTINLTGCN IAIQDTQISSVFQGMNVTSGGNLGNIGTARNVAIQLIDPRGTPIRMSGGSVEVPGITLATGATSASQDLSAQYITEEGQA TAGSVIASAQYAITYP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cupD1 | AAP84171.1 | putative fimbrial protein precursor | Not tested | PAPI-1 | Protein | 1e-22 | 41 |
