Gene Information

Name : araD (YpsIP31758_1910)
Accession : YP_001400885.1
Strain : Yersinia pseudotuberculosis IP 31758
Genome accession: NC_009708
Putative virulence/resistance : Unknown
Product : L-ribulose-5-phosphate 4-epimerase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0235
EC number : 5.1.3.4
Position : 2213682 - 2214377 bp
Length : 696 bp
Strand : -
Note : catalyzes the isomerization of L-ribulose 5-phosphate to D-xylulose 5-phosphate in the anaerobic catabolism of L-ascorbate; links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source

DNA sequence :
ATGCTCAACGAACTGAAGCAGCAAGTTCTTGCCGCTAATCTTGCTCTACCGCGCCATAATCTGGTGACATTCACTTGGGG
TAATGTTAGTGCTATCGATCGCCAAAAGGGTTTACTGGTGATTAAGCCTTCAGGTGTGGAATATGCGTCCATGACACTGG
ATGATATGGTGGTCGTGGAGTTGGAGAGCGGCAACGTCGTTGAGGGCAACAAAAAACCATCATCAGACACGGATACTCAC
CGCGTGCTGTATCTTAATTTCCCCCAAATTGGGGGCATAGTGCATACCCACTCCCGTCATGCAACTATTTGGGCGCAGGC
GGGGCTAGACTTGCCTGCTTGGGGGACAACCCATGCTGATTACTTCTATGGCTCCATCCCCTGTACCCGTTTGATGACAC
ATGAAGAAATTGCGGGTCGTTATGAATGGGAAACCGGTAATGTCATCGTTGATACTTTCCATGAAAGGGGCATCACCCCA
GATGCTGTACCTGCGGCGTTGGTGAACTCTCATGGGCCATTTGCCTGGGGTAGCAGTGCGGAGAATGCAGTACACAATGC
GGTAGTCTTGGAAGAGTTAGCGTATATGGGCATTTTCTCGCGTCAATTGAACCCGCAGTTGGGCGATATGCAACCGCAAC
TGCTGGATAAGCATTACTTACGTAAACATGGCAAGGATGCGTACTACGGCCAATAA

Protein sequence :
MLNELKQQVLAANLALPRHNLVTFTWGNVSAIDRQKGLLVIKPSGVEYASMTLDDMVVVELESGNVVEGNKKPSSDTDTH
RVLYLNFPQIGGIVHTHSRHATIWAQAGLDLPAWGTTHADYFYGSIPCTRLMTHEEIAGRYEWETGNVIVDTFHERGITP
DAVPAALVNSHGPFAWGSSAENAVHNAVVLEELAYMGIFSRQLNPQLGDMQPQLLDKHYLRKHGKDAYYGQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
araD YP_281517.1 L-ribulose-5-phosphate 4-epimerase Not tested Not named Protein 4e-59 57