Gene Information

Name : YpsIP31758_1862 (YpsIP31758_1862)
Accession : YP_001400837.1
Strain : Yersinia pseudotuberculosis IP 31758
Genome accession: NC_009708
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase (NAD) family protein
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : -
Position : 2156744 - 2158264 bp
Length : 1521 bp
Strand : -
Note : identified by match to protein family HMM PF00171

DNA sequence :
ATGCGTTATGCACATCCAGGAACACCAGAAGCTTTAGTCTCTTTCAAAGCAACCTATGGCAACTATATTGGTGGGGAATT
CGTTGAACCGCTCGGCGGTCAGTACTTTATGAATACTTCGCCAGTGAATGGCAGTGATATTGCGCAGTTCCCACGTTCCG
ACGCCCGAGACATCGACGCAGCGTTAGATGCCGCCCATCGAGCCGCTGACGCTTGGGGGAAAACCAGTGTTCAACATCGT
TCCAACCTCCTGCTACAAATGGCTGATCGTATCGAAGCCAATCTTGAATACCTTGCCGTAGCAGAAAGTTGGGATAACGG
AAAGCCGATTCGTGAAACACTGAACGCCGACCTGCCACTTGCGGTGGATCATTTCCGCTATTTTGCCGGGTGCCTGCGGG
CACAGGAAGGCGGTGTGGCAGAAATTGATGAGAAGACCGTTGCCTACCACTTTCATGAACCGCTAGGTGTGGTAGGGCAA
ATTATCCCATGGAACTTCCCGCTGCTAATGGCCGCGTGGAAACTCGCGCCCGCACTGGCTGCGGGTAACTGTGTGGTCCT
GAAACCAGCAGAGCAGACACCACTGGGAATAACACTGTTACTGGAGTTAGTCGGTGATCTCTTCCCAGCAGGTGTGCTCA
ATGTAGTTCAGGGCTACGGCCGTGAAGCAGGAGAAGCGTTGGCGAGTAGTAAACGTATTGCCAAAATTGCTTTTACTGGC
TCAACGCCGGTGGGTCGCCACATCATGGCTTGTGCTGCGGAGAATATTATTCCCTGTACTGTCGAACTGGGTGGCAAGTC
ACCGAACATCTATTTTGCCGATGTGATGGAGGCAGAACCCGAGTTCATTGAGAAAGCGATTGAAGGACTCGTCTTGGGCT
TCTTCAATCAGGGAGAAGTTTGTACCTGTCCTTCTCGTGCGCTGATCCATGAATCGATTTACGCACCATTTATGGCGCGA
GTCATGGCAAAGGTCGCCAATATTCGCCGTGGCGATCCACTAGATACCGAAACCATGATTGGTGCTCAGGCTTCCCGTCA
ACAGTTTGACAAAATCCTTTCCTATATTGACATCGCCCGTAAAGAAGGGGGGGAAATCCTCACGGGGGGCGCACGGGCAA
CTATGACACCTGCGCTGGATGCCGGTTTCTACATCCAGCCGACATTGATTAAAGGTGATAATCTGATGCGCTGCTTCCAA
GAAGAAATTTTTGGCCCAGTAATCGGTGTAACCACGTTTAAAGATGAAGCTGAAGCACTGGCTATTGCAAATCAGACGCA
ATTTGGCCTTGGTGCGGGTATCTGGACGCGTGATACCCATCTGGCTTATCGCATGGGTAGAGGCATTAAAGCGGGTCGTG
TCTGGACGAACTGCTATCATGTCTATCCTGCGCATGCTGCATTTGGCGGCTATAAACAGTCGGGCGTAGGGCGTGAAACA
CATAAAATGGCATTGAACCAGTATCAACAAACGAAGAACTTGTTGGTCAGCTATGACACCGCGCCTTTAGGGTTGTTTTG
A

Protein sequence :
MRYAHPGTPEALVSFKATYGNYIGGEFVEPLGGQYFMNTSPVNGSDIAQFPRSDARDIDAALDAAHRAADAWGKTSVQHR
SNLLLQMADRIEANLEYLAVAESWDNGKPIRETLNADLPLAVDHFRYFAGCLRAQEGGVAEIDEKTVAYHFHEPLGVVGQ
IIPWNFPLLMAAWKLAPALAAGNCVVLKPAEQTPLGITLLLELVGDLFPAGVLNVVQGYGREAGEALASSKRIAKIAFTG
STPVGRHIMACAAENIIPCTVELGGKSPNIYFADVMEAEPEFIEKAIEGLVLGFFNQGEVCTCPSRALIHESIYAPFMAR
VMAKVANIRRGDPLDTETMIGAQASRQQFDKILSYIDIARKEGGEILTGGARATMTPALDAGFYIQPTLIKGDNLMRCFQ
EEIFGPVIGVTTFKDEAEALAIANQTQFGLGAGIWTRDTHLAYRMGRGIKAGRVWTNCYHVYPAHAAFGGYKQSGVGRET
HKMALNQYQQTKNLLVSYDTAPLGLF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 5e-146 64
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 4e-153 63
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 4e-153 63
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 4e-153 63
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 3e-152 63

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
YpsIP31758_1862 YP_001400837.1 aldehyde dehydrogenase (NAD) family protein VFG0082 Protein 2e-146 64