Gene Information

Name : YpsIP31758_0170 (YpsIP31758_0170)
Accession : YP_001399167.1
Strain : Yersinia pseudotuberculosis IP 31758
Genome accession: NC_009708
Putative virulence/resistance : Unknown
Product : pili assembly chaperone
Function : -
COG functional category : N : Cell motility
COG ID : COG3121
EC number : -
Position : 193636 - 194367 bp
Length : 732 bp
Strand : -
Note : identified by match to protein family HMM PF00345

DNA sequence :
ATGCTTAGTATATATGCCCGCCACTATCATTATCTGTTTGTAACTTTATTAGTGGCTATGAGTCTGTCTTTTGCTAATGC
CAGTGTCGTGATGACAGGGAGTCGCATTATATATCCTGCGGCGGCAAGCGAGCACAGCATACAGTTAACCAATAATGACA
ATTTCCCTAATGCTGTTCAGGTGTGGTTAGACAGTGGCGATGAAAAATCGACACCAGAAACAGGCAAAGCCCCCTTTATA
GTGACTCCACCGTTCTTTCGTATTGAAGCAAATTCTGGCCAAACATTACGGTTAAAATATACGGGAAGTGGCCTTCCTAC
AGATAGGGAATCCGTATTTTATCTTAACTTTTTACAGATCCCTCCCGTCAATAAAGTAGAGAAAGATAACAAGATGTTAG
TGCTGTTGCGTAACCGCATTAAAGTATTTTATCGTCCCGAGAGTATTATCGGCCGTGTTGACCAAGTCTCTACCGCATTG
ACTTTTAGTCTACGAAAACAAGGAACTAACCTTGTTTTGACAGGAAAAAACCCAACTGGATTCTATGCCACAATTGCCAG
TGGTGAAATCGTGAGTGGGAGCATAAAACTTAAAGTAAAATCAAATATGATCGCGCCTATGTCTCAAGTTGAGTGGGTGA
TCCCAAATGCATCCGTACCCTCGTCAGCAACGATTAACTTTCTGATCATGAATGATTTCGGCGGGCAAGATGCCGGTAGC
TATCGTATTTAG

Protein sequence :
MLSIYARHYHYLFVTLLVAMSLSFANASVVMTGSRIIYPAAASEHSIQLTNNDNFPNAVQVWLDSGDEKSTPETGKAPFI
VTPPFFRIEANSGQTLRLKYTGSGLPTDRESVFYLNFLQIPPVNKVEKDNKMLVLLRNRIKVFYRPESIIGRVDQVSTAL
TFSLRKQGTNLVLTGKNPTGFYATIASGEIVSGSIKLKVKSNMIAPMSQVEWVIPNASVPSSATINFLIMNDFGGQDAGS
YRI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cupD2 AAP84170.1 putative pili assembly chaperone Not tested PAPI-1 Protein 4e-44 45