Gene Information

Name : yfeA (YpsIP31758_1705)
Accession : YP_001400682.1
Strain : Yersinia pseudotuberculosis IP 31758
Genome accession: NC_009708
Putative virulence/resistance : Virulence
Product : chelated iron ABC transporter periplasmic protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0803
EC number : -
Position : 1976390 - 1977325 bp
Length : 936 bp
Strand : -
Note : identified by similarity to SP:Q56952; match to protein family HMM PF01297

DNA sequence : 
ATGATAGAACGACTAAACTCCCCTTTTCTACGGGCTGCAGCCTTGTTTACAATTGTCGCATTCTCATCGCTGATCAGTAC
CGCTGCTTTAGCAGAAAATAATCCCAGCGATACAGCCAAAAAATTCAAAGTTGTGACTACATTCACAATCATTCAGGATA
TTGCACAAAATATCGCCGGTGATGTTGCCGTGGTGGAGTCAATAACCAAGCCAGGCGCAGAGATTCATGACTATCAACCT
ACCCCACGAGATATTGTAAAAGCACAGTCAGCAGACCTTATCTTATGGAATGGCATGAATCTGGAGCGTTGGTTTGAGAA
GTTCTTCGAAAGTATTAAAGATGTCCCGTCTGCCGTCGTGACCGCAGGTATTACACCCCTGCCTATCCGTGAAGGCCCCT
ATAGCGGCATTGCCAACCCACATGCCTGGATGTCGCCATCAAATGCGCTAATATATATTGAGAATATCCGCAAAGCGTTA
GTTGAACACGATCCCGCTCATGCAGAAACCTATAACCGTAACGCGCAAGCCTATGCTGAAAAAATTAAGGCGCTAGATGC
TCCACTGCGTGAGCGTTTATCTCGTATTCCTGCGGAACAGCGTTGGTTAGTAACCAGTGAAGGGGCATTTAGTTATCTTG
CCAAAGACTATGGTTTTAAAGAGGTTTACTTATGGCCAATCAATGCAGAGCAACAAGGTATTCCGCAACAAGTTAGACAC
GTGATTGATATTATTCGCGAAAATAAAATTCCGGTGGTGTTTAGTGAGAGTACTATTTCCGACAAACCCGCCAAACAAGT
GAGTAAAGAAACCGGTGCACAATATGGCGGCGTGCTATATGTTGATTCTCTGTCGGGCGAAAAAGGCCCGGTCCCCACTT
ACATCAGTTTAATTAACATGACTGTAGATACTATCGCTAAAGGATTCGGTCAATGA

Protein sequence : 
MIERLNSPFLRAAALFTIVAFSSLISTAALAENNPSDTAKKFKVVTTFTIIQDIAQNIAGDVAVVESITKPGAEIHDYQP
TPRDIVKAQSADLILWNGMNLERWFEKFFESIKDVPSAVVTAGITPLPIREGPYSGIANPHAWMSPSNALIYIENIRKAL
VEHDPAHAETYNRNAQAYAEKIKALDAPLRERLSRIPAEQRWLVTSEGAFSYLAKDYGFKEVYLWPINAEQQGIPQQVRH
VIDIIRENKIPVVFSESTISDKPAKQVSKETGAQYGGVLYVDSLSGEKGPVPTYISLINMTVDTIAKGFGQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitA NP_806464.1 iron transporter periplasmic-binding protein Virulence SPI-1 Protein 3e-84 63
sitA NP_461782.1 periplasmic binding protein Virulence SPI-1 Protein 3e-84 63
sitA AAD41065.1 SitA Virulence centisome 63 pathogenicity island Protein 2e-84 63
sitA YP_217781.1 iron transporter: fur regulated Virulence SPI-1 Protein 3e-84 63
sitA NP_457255.1 Iron transport protein, periplasmic-binding protein Virulence SPI-1 Protein 3e-84 63

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
yfeA YP_001400682.1 chelated iron ABC transporter periplasmic protein BAC0439 Protein 9e-136 100
yfeA YP_001400682.1 chelated iron ABC transporter periplasmic protein BAC0349 Protein 1e-84 63

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
yfeA YP_001400682.1 chelated iron ABC transporter periplasmic protein VFG0525 Protein 1e-84 63