Gene Information

Name : YpsIP31758_1676 (YpsIP31758_1676)
Accession : YP_001400653.1
Strain : Yersinia pseudotuberculosis IP 31758
Genome accession: NC_009708
Putative virulence/resistance : Virulence
Product : fimbrial assembly chaperone protein
Function : -
COG functional category : N : Cell motility
COG ID : COG3121
EC number : -
Position : 1947422 - 1948159 bp
Length : 738 bp
Strand : +
Note : identified by match to protein family HMM PF00345; match to protein family HMM PF02753

DNA sequence : 
GTGCGACTCTTAACGACACTGACACTCTTAATATTATCGGTTGTGGCGACTGTGGCTCGTGCTGAAGTGATGATCAGTGG
GACACGTGTTATTTATGAAGAGAAACAACGTGAGGGGGTGGTAAAGGTTTCCAATACGGGCGATATGCCGGTCCTGCTTC
AGGCCTGGATAGATAAAGGTGATGCGAACGCACGCCCAGAGGCTATCAAGGTGCCGTTTAGTGTAACCCCCCCAGTAGTA
CGTTTAGACCCTAAAAGGGATCAGACTATTCGTCTTTTTCGCACTGATGGTGGATTAGCGGCTGATCGTGAAACCCTATT
TTGGTTTAACTTATTAGAAGTCCCGCCAAAGCCAATCCAACGTGCGGCTGGTGGTGAGAACAAAATGCAATTGGCTTTCC
GTACCAGAATTAAAATGTTTTACCGCCCTGAAGGATTAACCGTATTACCTGCGCAAGCGGCCAAGAGTCTCGCATTTTCA
ATGAAAGGCAATCAGATCGTCATAAAGAATGCCTCACCGTATTACATTACCTTGAGAAAGCTAGAATTACGCACGTCAGA
GAAAGGGCCTGTATTGGCTAATTTTACTAAAATCAATAATAAAATGGTTGCCCCTTTTAGTGAACTAAGCTTACCTACGA
GTGCAAAAGCATCGATCAATAATTCGGCACAAGTTTTTTATTCTGTTATTAATGATCAGGGCGGCGAAACTCAAGGTACG
CAAAAACTGACCCAATAA

Protein sequence : 
MRLLTTLTLLILSVVATVARAEVMISGTRVIYEEKQREGVVKVSNTGDMPVLLQAWIDKGDANARPEAIKVPFSVTPPVV
RLDPKRDQTIRLFRTDGGLAADRETLFWFNLLEVPPKPIQRAAGGENKMQLAFRTRIKMFYRPEGLTVLPAQAAKSLAFS
MKGNQIVIKNASPYYITLRKLELRTSEKGPVLANFTKINNKMVAPFSELSLPTSAKASINNSAQVFYSVINDQGGETQGT
QKLTQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ecpD1 AAO49832.1 pilin chaperone ecpD1 Not tested SPI-3 Protein 1e-45 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
YpsIP31758_1676 YP_001400653.1 fimbrial assembly chaperone protein VFG0007 Protein 5e-39 42
YpsIP31758_1676 YP_001400653.1 fimbrial assembly chaperone protein VFG1145 Protein 2e-33 41