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Name : YpsIP31758_1518 (YpsIP31758_1518) Accession : YP_001400496.1 Strain : Yersinia pseudotuberculosis IP 31758 Genome accession: NC_009708 Putative virulence/resistance : Unknown Product : ShlB/FhaC/HecB family hemolysin secretion/activation protein Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG2831 EC number : - Position : 1760564 - 1762252 bp Length : 1689 bp Strand : + Note : identified by match to protein family HMM PF03865 DNA sequence : TTGCGTTATTGTTATTTTATATTACACACGGCTATATTATTTCCACTGTTGGTTATTTCTCGCGCCGGACAGAGTGCGGA ATTAACGCCTATTCAACAGCAAACTCTCCATCAGCAAGAGCGGCAGCGGGCGCTGGAAGAACGTCTGGCTCCGCCGACGC CAGATGTGCGCTTATCTGCACCTTCGGCCTCTTCGGATCGCCTTATTTTCCCTGTGGAAAAGCCCTGCTTTGTTATTGAC CGCGTCACACTCAGCGGCACTGAACCGTTACCCCGTTGGTTGCCGTTACAGCGTATTGCTAATCAGGCTCTAGGTCAGTG TTTGGGCGGGCAGGGGATTAACCAACTGATGAGCCAATTACAAAACCGTTTAGTGGGTCATGGTTATGTGACGACCCGGG TGCTTGCTCCGCAGCAGGATTTGAACAGCGGCACACTGGCGTTACAAGTGGTGCCCGGCAAAATACACCGCGTGGCGCTG ACACCAGAGAGTGACCGCCATGTCACGCTGTTCAGTGCCTTTCCCGCACGCCCCGGTCACTTATTGGATCTGCGTGATAT TGAGCAAGGGCTGGAGAATCTTCAACGTATCCCCACAGTGCAAGCCAGCATGGAATTGATCCCCGGCAGCGCGCCCGGAG AGACCGATATCGCCCTAAGCTGGAAGCAGAGCAAAATGTGGCGTTTGGCCGCCTCACTGGATGACTCTGGGACTCGCAGT ACTGGCCGTTATCAGGGCGGTGCGACGCTGTTTCTGGATAACCCATTCTCTTTGAGTGACCAGTTTTATGTCTCGGCGGG TGGCTCAATAAAAAATCGCGGCGATAAAGGCACCAATAACCTGACTGGCCACTACTCATTGCCGTTCGGTTACTGGACAG CCGGCATAACCGCCAGCAGTTATGATTATCACCAGACAGTGGCGGGCCTGAATAGCGATTACAACTATCGGGGCGAAAGT GAAAATGTGTCATTGCAACTCAGCCGCCTGTTGCACCGCAATGCCAGCCAAAAAACCACACTCACCTACGATGTCCTGAC CCGTTCGTCGAAAAACTACATCAATGATACCGAAGTTGAGGTTCAACGCCGCCGCACATCTGCCTGGCGCATAGGGCTGC AACATCGCCACTTTATTTCGCAGGCCACGCTGGATGCCGGGGTGAGTTATCAGCGCGGTACCCGTTGGTTTGGGGCGGTT CCGGCTCAAGAAGAATATTTTGATGAAGGCACGGCGTTAAGCAAGATTCTGCAATTGAATGCACAACTGGATATTCCCTT CTCGGTGATGGCGCAAAATTTCCATTACAACGTGCAATACCAGCGTCAGAGCAGCAGCACCCCGTTGACCCCACAGGATC AATTCAGCATCGGTGGCCGTTGGTCAGTGCGCGGCTTTAATGGGGAGCGGACCCTCAGTGCTGATCGTGGCTGGACGGTG CGTAATGATCTGGGTTGGTACACACCGATACAGGGGCAAGAGATCTATGTCGGCCTTGATTATGGCGAAGTGGGTGGCCG CGGAAGCGCTTATCTGCTGGGTAACCATCTGGCGGGTGCCGCTGTCGGTATTCGCGGCAACGTACTCAATACCCGCTATG ACCTGTTTGCCGGCAAACCCCTGTCTGAACCCGATGGCTTCCAATCCGATGCCGTGACCGTGGGCTTTAACCTGAACTGG CAATACTAA Protein sequence : MRYCYFILHTAILFPLLVISRAGQSAELTPIQQQTLHQQERQRALEERLAPPTPDVRLSAPSASSDRLIFPVEKPCFVID RVTLSGTEPLPRWLPLQRIANQALGQCLGGQGINQLMSQLQNRLVGHGYVTTRVLAPQQDLNSGTLALQVVPGKIHRVAL TPESDRHVTLFSAFPARPGHLLDLRDIEQGLENLQRIPTVQASMELIPGSAPGETDIALSWKQSKMWRLAASLDDSGTRS TGRYQGGATLFLDNPFSLSDQFYVSAGGSIKNRGDKGTNNLTGHYSLPFGYWTAGITASSYDYHQTVAGLNSDYNYRGES ENVSLQLSRLLHRNASQKTTLTYDVLTRSSKNYINDTEVEVQRRRTSAWRIGLQHRHFISQATLDAGVSYQRGTRWFGAV PAQEEYFDEGTALSKILQLNAQLDIPFSVMAQNFHYNVQYQRQSSSTPLTPQDQFSIGGRWSVRGFNGERTLSADRGWTV RNDLGWYTPIQGQEIYVGLDYGEVGGRGSAYLLGNHLAGAAVGIRGNVLNTRYDLFAGKPLSEPDGFQSDAVTVGFNLNW QY |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| S1 | AAQ19124.1 | putative hemolysin activator HlyB | Not tested | PAI I CL3 | Protein | 5e-169 | 64 |
| NMB1762 | NP_274762.1 | hemolysin activation protein HecB | Not tested | IHT-C | Protein | 3e-88 | 41 |
