|
Name : JJD26997_0256 (JJD26997_0256) Accession : YP_001397481.1 Strain : Campylobacter jejuni 269.97 Genome accession: NC_009707 Putative virulence/resistance : Unknown Product : ISHa1675 transposase B Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0675 EC number : - Position : 233470 - 234711 bp Length : 1242 bp Strand : + Note : identified by match to protein family HMM PF01385; match to protein family HMM PF07282; match to protein family HMM TIGR01766 DNA sequence : TTGCTTAGTGCAGTAAAATATAGAATTTATCCTACTAAAGCTCAAAAAGAACTCATCCATAAACACTTTGGTTGTGCTAG AGTAGTTTATAATCATTTCTTAGATTATCGTCAAAAACAATTTGCTAAAGGCATAAAAGAAACATACTTTACTATGCAAA AAGAGCTTACTCTTCTAAAAAAGCAAGATGAATATAAATATCTTAATGAGTGTGCTTCGCAATCTTTACAGATGGCTCTT AGACAATTAGTTACTGCCTTGGATAATTTCTTTGCTAAAAGAGCAAAATACCCCAATTTCAAGTCAAAGAAAAATGCAAG GCAAAGTTATGCTATTCCACAGAATATTAAGCTAGATAATAAAAAAGTTTATGCTTCTAAATTTACAGAAGGTATAAAAA CTAAAATCCATAGAAAGCTTGATAAGGATTGTATAATAAAACAAGCCTTTATTTCTAAAATAGCCGATGAATACTACATT GCAATTAGCTATGAAAACAATAAATCTTTACCTAAGCCAAAAGTAATAGAAAATGCTGTTGGTTTAGATATGGGTTTGGA AAATCTTATTATTAGAAGTGATTGCGTAATTTATAAAAATCACAAATTCTTACAAGATAAAGAAAATAAACTCATAAAAC TTCAAAAACAACTTAGTAAAAAACAAAAAGGTTCAAATAATTATGCAAAGACTAAGCTAAAAGTAGCTAAAGCTCATCAA AAAATTACAAGAGCAAGAGATGATTATTTACATAAGATAAGCGATGAAATCACAAATTTATATGATTTTATAGCTGTTGA AAATCTAAATATCAAAGGACTAATCAAAAACAAACATTTATCTAAATCTATTGCTAATGCTAGTTGGGGTAAATTTATCA ACTTACTAACTTACAAAGCCGAAAACAAAGGCAAAACACTAATGCAAATTGATAAATTTTTCCCTAGTTCTCAAATATGT AGCAATTGCGGAAGCAATACAGGTAAAAAGCCTCTGCATATTAGGAGTTTTACTTGCCCTAATTGCAATACAAAACACCA TAGAGACTTAAATGCTAGTATCAATATAAGAAATTATGCGCTAGGTATCATTGATGATAGGTATAAAATAAAATTAGATA AATCTAGGGTAGGAATTACCCAAAGTTACGCTTGTAAAGATAGCTCTAGTGGGGTATCAAAATATGGTTACATACTTGAT ACTAGCTATCTATCGTTGAAGCAAGAAGCCCACTTGCTTTAG Protein sequence : MLSAVKYRIYPTKAQKELIHKHFGCARVVYNHFLDYRQKQFAKGIKETYFTMQKELTLLKKQDEYKYLNECASQSLQMAL RQLVTALDNFFAKRAKYPNFKSKKNARQSYAIPQNIKLDNKKVYASKFTEGIKTKIHRKLDKDCIIKQAFISKIADEYYI AISYENNKSLPKPKVIENAVGLDMGLENLIIRSDCVIYKNHKFLQDKENKLIKLQKQLSKKQKGSNNYAKTKLKVAKAHQ KITRARDDYLHKISDEITNLYDFIAVENLNIKGLIKNKHLSKSIANASWGKFINLLTYKAENKGKTLMQIDKFFPSSQIC SNCGSNTGKKPLHIRSFTCPNCNTKHHRDLNASINIRNYALGIIDDRYKIKLDKSRVGITQSYACKDSSSGVSKYGYILD TSYLSLKQEAHLL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tnpB | AAF80205.1 | TnpB | Not tested | cag PAI | Protein | 6e-115 | 65 |
| tnpB | AAC44710.2 | TnpB | Not tested | cag PAI | Protein | 6e-115 | 65 |
