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Name : ctsE (JJD26997_1818) Accession : YP_001398772.1 Strain : Campylobacter jejuni 269.97 Genome accession: NC_009707 Putative virulence/resistance : Virulence Product : general secretory pathway protein E Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 1598561 - 1600120 bp Length : 1560 bp Strand : - Note : identified by match to protein family HMM PF00437 DNA sequence : ATGGAAAGTAGAATGGATAAAATTTTTCAAGCTTATATTGATAATGAAATAAGTCTTGATGAAATTTGCACTAAATTTAA TATCACTTCTTGGGATTTTTTTAAAAAATTAGCAAATTTTTGTAATTTAAATTTTGTTGATTTAGATAAAGATGGCGATT TTATTTATGAAGGTATACCTTTTTCTTTACTTTTAAAATTTAAATTTCTACTTATTAAAAACAATGACGGCTTTATGATT ATTAGATCCAAACCTTGTTCTTTAGAGCTTTTAGAGCAAGTTAAGACTTTTATGATTTGTGAGAAAATCGACACTGCAAT TGCCGATGAATTAAAGATAGCTAAAATTTTAAATCAAATTCGCATTCAAGAGGAGATTAAAAGATTAAGCATTAAGCTTA GACTTGAATGGCAAGAAAATCAAAAAAGAGATGATCAAAGTTGCATCAGTCAAATTTTTGATTTTTTATTACATGAAATT TTATCTTTTCATGCGAGTGATATTCATATAGAAGCAAGGAATGATGATGCTTTGATTAGATTTAGGGTTGATGGAATTTT GCGTGAATTTGCTATTTTTGAGAAGGATATTTATGAAGCTTTGGTTTTTCATGTCAAATTTTTAGCTTGTTTGAATTTAG CTGAATCAAGAAAAACGCAAGATGGAAGTTTTGAATTAGATTTTGAAAATGAAAGATATGATTTTCGTGTTTCATGTTTG CCTTTGATTTATGGTGAAAGTGTTGTTATAAGAATTTTAAAACATGATAAAGAAATTTTGGATTTGTATAAACTAAATCT TGGAAATAAAAATTTAGAAATTTTAAAAAAGATTTTACATCGTCCCAATGGAATGATTTTATTAACCGGTCCTACAGGTA GCGGTAAAAGCACAACTTTACACGCGTGTTTAAATGAGTTGAAAAGTATTGAAAAAAAGATTATCTCCGCAGAAGATCCT ATAGAATATAAAATTCCTTTGGTGCAGCAAATTTTGCTCAATTCAAAAGTTGGAGTCGAGTTTAATAGTGTTTTAAGAGC AATTTTAAGGCAAGATCCTGATATTATCATGATAGGAGAAATCCGGGATGAAGAAAGTTTAGATATTGCACTTAAAGCTT CTTTAACAGGTCATTTGCTTTTAAGTACCTTGCATACTAATGATGCTCTTAGCACCATTGATAGGCTTTTGGATATGCAA GCAAAAAGTTACTTGATAGCATCGGCTTTAAGTCTTGTTATAGCGCAGCGTTTGGTTAGAAAACTTTGTCCTTGGTGCAA ACAAAAAAGCAAAAAACATTATATTGAATTTGAAGGTGAATTTTTTGAACCAAAAGGATGTGAGCGTTGCCATCATAGTG GATTTTTTGGCAGAGAATTAATCGCTGAATGCTTAGAGATCAATGAAGATTTGGCTTGTGCAATTAGGGAAAATCAAAAT AAAACGATTTTAATGGAGCTTGCAAAAAAACATGGCTTTCAAACTATGTTTGAACAAGGTTTAAAAAAAGCCAAAGAAGG TCTTACAAGTATAGATGAGCTTTTAAGGGTTGTAAGATGA Protein sequence : MESRMDKIFQAYIDNEISLDEICTKFNITSWDFFKKLANFCNLNFVDLDKDGDFIYEGIPFSLLLKFKFLLIKNNDGFMI IRSKPCSLELLEQVKTFMICEKIDTAIADELKIAKILNQIRIQEEIKRLSIKLRLEWQENQKRDDQSCISQIFDFLLHEI LSFHASDIHIEARNDDALIRFRVDGILREFAIFEKDIYEALVFHVKFLACLNLAESRKTQDGSFELDFENERYDFRVSCL PLIYGESVVIRILKHDKEILDLYKLNLGNKNLEILKKILHRPNGMILLTGPTGSGKSTTLHACLNELKSIEKKIISAEDP IEYKIPLVQQILLNSKVGVEFNSVLRAILRQDPDIIMIGEIRDEESLDIALKASLTGHLLLSTLHTNDALSTIDRLLDMQ AKSYLIASALSLVIAQRLVRKLCPWCKQKSKKHYIEFEGEFFEPKGCERCHHSGFFGRELIAECLEINEDLACAIRENQN KTILMELAKKHGFQTMFEQGLKKAKEGLTSIDELLRVVR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 7e-58 | 43 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 5e-58 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| ctsE | YP_001398772.1 | general secretory pathway protein E | VFG1876 | Protein | 1e-57 | 44 |
| ctsE | YP_001398772.1 | general secretory pathway protein E | VFG2048 | Protein | 7e-59 | 43 |
