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Name : clpB (JJD26997_1422) Accession : YP_001398457.1 Strain : Campylobacter jejuni 269.97 Genome accession: NC_009707 Putative virulence/resistance : Virulence Product : ATP-dependent chaperone protein ClpB Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 1258693 - 1261272 bp Length : 2580 bp Strand : + Note : identified by match to protein family HMM PF00004; match to protein family HMM PF02861; match to protein family HMM PF07724; match to protein family HMM PF07728 DNA sequence : ATGGCAAATATACAAGATTTTTTAACTGATAATATGCTTTCAAACCTTGAAAGTGCAGCATCTTTAGCTATACATTCTAA AAATACTGAAGTCGTACCTTTGCACCTTTTATGGGCTTTAAGCGTAGATAGTACAAGTATTTTAAATCAAATTTTAAATA AATTAAATATTTCTAAAGAAGCCTTAGAACTTGAAATTAAAAGCAGAATTTCAAAACTTGCAACGAGTTCAAATGTAAGC CGTGAAAATATACGCTTTTCCAATGAACTTATAAATTCATTAGAAAATGCTAAAGGATTAATGAGCGCTAATGGAGATAG TTATTTAAGTGTGGATACTTGGCTTATAAGTGAAAGTCAAAAAAGTCCTATTAAAGAAATTTTGGCGCAATTTTTAGATT TAAGAGAATTTCAAAAAGAGTTTGAAAGTCTAAGAGCAGGACGCAAAATTGATAGCAAAACAAGCGATGAAACCTTAGAT AGCTTAAATAAATTTGGTATAGATTTAACCTTAAAAGCAAGTGAGGGTAAACTTGATCCTGTTATAGGTAGAGAAGAAGA AATCGAACGTTTAATGCAAATTTTAATACGCAAAACCAAAAACAATCCTATACTTTTAGGTGAACCAGGTGTAGGAAAAA CAGCTATAGTAGAAGCTCTAGCACAAAGAATTATCAAAAAAGATGTTCCAAAATCTTTACAAAATAAAAAAGTTATCGCT CTTGATATGAGTGCTTTAATTGCAGGTGCAAAATACAGAGGAGAATTTGAAGATAGATTAAAAGCTGTGGTTAATGAAGT GATAAAAAGTGAAAATATCATTCTTTTTATCGATGAAATTCACACTATAGTAGGGGCTGGAGCGAGTGAAGGTAGCATGG ATGCGGCAAATATTTTAAAACCCGCTCTTGCAAGAGGTGAGCTCCATACCATAGGTGCAACTACTTTAAAAGAATATCGT AAATATTTTGAAAAAGATGCGGCCTTGCAACGCCGTTTTCAACCTGTAAATGTAGGTGAACCAAGTGTTAATGAGGCTTT AGCTATGTTAAGGGGTATAAAAGAAAAGCTTGAAATTCATCATAATGTAACTATAAATGATAGTGCTTTAGTAGCCGCAG CTAAACTTTCAAAGCGTTATATAGCGGATCGTTTTTTACCTGATAAGGCTATTGATTTAATCGATGAAGCTGCAGCTGAA CTGAAAATGCAAATTGAAAGTGAACCAAGTTCTTTAAGAAAGGTACGCAAAGACATAGAAACTTTAGAAGTTGAAAATGA AGCCTTAAAAATGGAAAATGATGAGAAAAATCAAAAAAGACTCGATGAAATCGCAAAAGAACTAGCCAATTTAAAAGAAA AACAAAATGCCTTAAATTCACAGTTTGAAAATGAAAAAAGCGTTTTTGATGGCATAAGTACCAAGAAAAAAGAAATTGAC CTGCTTAAAAATGAAGCTTCTTTAGCTAAAACTAGGGGTGAATTTCAAAAAGCAGCCGAGCTAGAGTATGGAAAAATTCC AAATCTTGAAAAAGAAGTAGAAATTTTAGAAGATAAATGGAAAAAAATGAGTGAAAATGGAGTTTTACTTAAAAATCAAG TAGATGAGGATTTGGTTGCTGGAATTTTAAGCAAATGGACGGGTATTAGCGTACAAAAAATGCTAACTTCTGAAAAACAA AAATTCTTAGAAGTGGAAAAACATTTAAAAGAAAGTGTCATAGGACAAGATAAAGCCTTAAGTGCTTTAGCTAGAGCCAT TAAACGCAACAAAGCAGGACTTAATACGGATAATAAGCCTATAGGAAGCTTTTTATTTTTAGGACCAACAGGGGTAGGAA AAACACAATCAGCTAAAGCTTTGGCAAAATTTTTATTTGACGATGAAAAAGCAATGATTCGCTTTGATATGAGTGAATTT ATGGAAAAACATAGTGTTTCAAGACTCTTAGGTGCGCCTCCAGGATACATAGGACATGAAGAAGGTGGAGAGCTTACTGA AGCTGTACGAAGAAAACCTTATAGCGTACTTTTGTTTGATGAAGTTGAAAAAGCGCATAAAGATGTATTTAATGTGCTTT TAGGGATTTTAGATGATGGTAGAGCAACCGATAGCAAAGGCGTAACAGTGGATTTTAAAAATACCATTATCATTTTAACT TCTAATATCGCCTCAAATGTTATCATGAATTTAAATGGAAAAGAACAAGAAGATGCGGTAAAAAATGAATTAAAAAATTT CTTTAAACCTGAGTTTTTAAACCGCCTAGATGATATTATCACCTTTAATCCACTTGGAAAAGATGAAGCTTATGAAATAG TCAAGCTTTTATTTAAAGATTTACAAATGAGCTTAGAAAACAAGGGGATAAAAGCAAGTTTAAGCGAAAATGCAGCCCTT TTAATCGCTAAAGATGGTTTTGACCCTGATTTTGGTGCTAGACCTTTAAGAAGAGCTATTTATGATCTCATAGAAGATAA ATTAAGCGATATGATACTTGCTGATGAACTTCATGAAAATGATAACATTTTAATCGATGCCGAAAATGATGAAATCGTGA TCAAAAAAATACAAATTTGA Protein sequence : MANIQDFLTDNMLSNLESAASLAIHSKNTEVVPLHLLWALSVDSTSILNQILNKLNISKEALELEIKSRISKLATSSNVS RENIRFSNELINSLENAKGLMSANGDSYLSVDTWLISESQKSPIKEILAQFLDLREFQKEFESLRAGRKIDSKTSDETLD SLNKFGIDLTLKASEGKLDPVIGREEEIERLMQILIRKTKNNPILLGEPGVGKTAIVEALAQRIIKKDVPKSLQNKKVIA LDMSALIAGAKYRGEFEDRLKAVVNEVIKSENIILFIDEIHTIVGAGASEGSMDAANILKPALARGELHTIGATTLKEYR KYFEKDAALQRRFQPVNVGEPSVNEALAMLRGIKEKLEIHHNVTINDSALVAAAKLSKRYIADRFLPDKAIDLIDEAAAE LKMQIESEPSSLRKVRKDIETLEVENEALKMENDEKNQKRLDEIAKELANLKEKQNALNSQFENEKSVFDGISTKKKEID LLKNEASLAKTRGEFQKAAELEYGKIPNLEKEVEILEDKWKKMSENGVLLKNQVDEDLVAGILSKWTGISVQKMLTSEKQ KFLEVEKHLKESVIGQDKALSALARAIKRNKAGLNTDNKPIGSFLFLGPTGVGKTQSAKALAKFLFDDEKAMIRFDMSEF MEKHSVSRLLGAPPGYIGHEEGGELTEAVRRKPYSVLLFDEVEKAHKDVFNVLLGILDDGRATDSKGVTVDFKNTIIILT SNIASNVIMNLNGKEQEDAVKNELKNFFKPEFLNRLDDIITFNPLGKDEAYEIVKLLFKDLQMSLENKGIKASLSENAAL LIAKDGFDPDFGARPLRRAIYDLIEDKLSDMILADELHENDNILIDAENDEIVIKKIQI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 2e-145 | 45 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpB | YP_001398457.1 | ATP-dependent chaperone protein ClpB | VFG0079 | Protein | 2e-151 | 42 |
| clpB | YP_001398457.1 | ATP-dependent chaperone protein ClpB | VFG2084 | Protein | 5e-104 | 41 |
