|
Name : JJD26997_1240 (JJD26997_1240) Accession : YP_001398300.1 Strain : Campylobacter jejuni 269.97 Genome accession: NC_009707 Putative virulence/resistance : Unknown Product : NLPA family lipoprotein Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG1464 EC number : - Position : 1086936 - 1087709 bp Length : 774 bp Strand : + Note : identified by match to protein family HMM PF03180 DNA sequence : ATGAAAATCAAATCTTTATTTATAGCAAGTATTTTAACATTAAGTCTTAATGCAAATGCATTAGAAACCATCACAGTTGC AGCAACCCCTATCCCTCATGCTGAAATCCTAGAGCAAGTAAAACCTGATTTAGAAAAACAAGGCTATAAACTTGAAATCA AAGAATTTACGGATTATGTTTTGCCTAATCTAGCTGTTGATAATGGAGAAGCCGATGCAAATTTTTTCCAACATACTCCT TATTTGGAAGAATTTAATAAAAACAAAGGTACCAAACTTATCAAAGTAGCTGCCATACACATAGAACCTATGGCTGTTTA CTCCAAGAAATATAAAAGTCTAGATGATATTAAAGAAGGGGCTAAAATCGCTATTCCAAATGATCCAACCAATGAAAGTA GAGCTTTAGATATTATTGCAAAAAAAGGTTTGGTAAAATTTAAAGATAAGGCTTTAAAAACACCTCTTGATCTTATAGAC AATCCTAAAAAAATTAAATTTGTAGAATTAAAGCCCGCACAACTTCCAAGAGCTTTAGATGATGTTGATTTTGCTGTAAT TAACTCTAATTACGCTCTCTCTGCAAATCTAAATCCTGCAAAAGATAGCGTATTTATCGAAGATAAAGAAAGTCCGTATG CAAACATTCTTGTTGTAAGAGTGGGACATGAAAACGATTCAAAAATCAAAGCCTTAATCCAAGCTCTACAAAGTGATAAA ATCAAACAATTTATCATAGAAAAATACAACGGATCTGTTTTACCTGCTTTTTAA Protein sequence : MKIKSLFIASILTLSLNANALETITVAATPIPHAEILEQVKPDLEKQGYKLEIKEFTDYVLPNLAVDNGEADANFFQHTP YLEEFNKNKGTKLIKVAAIHIEPMAVYSKKYKSLDDIKEGAKIAIPNDPTNESRALDIIAKKGLVKFKDKALKTPLDLID NPKKIKFVELKPAQLPRALDDVDFAVINSNYALSANLNPAKDSVFIEDKESPYANILVVRVGHENDSKIKALIQALQSDK IKQFIIEKYNGSVLPAF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SAAV_0786 | YP_003281709.1 | ABC transporter substrate-binding protein | Not tested | SaPIAv | Protein | 6e-50 | 50 |
| nlpA | AAW51766.1 | NlpA | Not tested | AGI-3 | Protein | 8e-39 | 45 |
