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Name : polA (CKL_0669) Accession : YP_001394071.1 Strain : Clostridium kluyveri DSM 555 Genome accession: NC_009706 Putative virulence/resistance : Unknown Product : DNA polymerase I Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0749 EC number : 2.7.7.7 Position : 659557 - 662199 bp Length : 2643 bp Strand : + Note : has 3'-5' exonuclease, 5'-3' exonuclease and 5'-3'polymerase activities, primarily functions to fill gaps during DNA replication and repair DNA sequence : ATGTCTCGAGAAAAATTATTGATATTGGATGGACATAGTTTAATGAATAGAGCTTTTTATGCACTGCCGGATTTGACCAA TTCAGAAGGGACTCATACAAATGCAGTTTATGGATTTATAAATATGCTGTTGAAAATGAAAAAGGAAATTGAACCCAGTC ACATAGTATGTACTTTTGATAGAAGTGCACCTACCTTTAGACATGATAAATATAGTGAATATAAAGCCGGCAGAAAAAGA ATGCCTCCTGAGCTGTCAGAACAGTTTCCTATAGTTAAGGAAATATTGGAGCTTTTATCCATAAATATTTTTGAAATAGA TGGATTTGAAGCAGATGATCTTATGGGTACATTATCCGTTTTTGCAGAAAAAAAAGGCATGGAAGTATATATAGTTACAG GAGATAGAGATGCCCTCCAGCTGGCCACAGATTCAGTGAAAATTGTAATAACTAAAAAAGGTATAACACAAAAGGAAATA TATGATAGAAATAAAATTATAGATGATTATGGAGTAACCCCTACGGAATTTATAGATGTAAAAGGGCTTATGGGGGACGC TTCGGATAATATTCCTGGGGTACCTGGTATAGGAGAGAAAACTGCCCTTAAATTGATAAAAGAGTATAAAAGCATAGAAA ATGTACTTTGTAATATAGATAATATTAAAGGGAAAAAAGTTCAAGAAAATTTAAAAAATTATATGGAACAGGCTGTATTT AGTAAAAAGCTTGCCACTATTGTCACAGATGTTCCTATAGAACTGGATTTACAATCTATTGAATCGAAAGAACAATATAA TGCCGAAGGCTTAAGAAAATTATTTGAAAAACTTCAGTTTAAATCCTTAATGGATAAAATACCTAAAGTGGAGGAACAGG ATAAAATAGAAGTGGAAGATTTTCAGGTAGAATGTGAGGTTATAGATACTTTAAATAAAGTTCATAACTTTATAGACTCT TTAGAAGCTGAAGATATGAAAAATAAATTACTTTATATTAATTTCAAAGTTGTAGATGAGAATAGTTATGCTAAAAATTA CATAGATAAGATATTTATAAATATAGGAGAAAAAAATTTTGAAATACACATAAAAGAAATATATGATGAAAATAAAATTA AAGCAGTGGAAACAGCTAAAATGTTGTTTGAAAATTCTAGCTTAAGTAAAGTGAGTTATGATGTGAAAGTACCTTGCAGT ATATTGCATAGAATGGGAATAAAGCTTTTAGGCATAGAATTCGATATAAAGATAGCAGCTTATTTAATGGATCCGGCTAG GACCAACTATGAATTACCGGATATTATTAAGGAGTATCTGAATATAGAAATCTCTGAGGAAAGGGAAGATTGTTTTATAA AAGAAACATTGTTGTTTAGCAGGTTATACTCTACTTTAAAGAAGAAGATATCAGATTCTTCTATGGATAAATTGTTGTAT GAAGTAGAACAGCCACTTACTTTTGTACTGGCATCTATGGAGTGTGAAGGATTTAAGGTGGATAAGGATAAGTTAACTGA GATGGAGGAGAAATTTAAAATAGAAATAGATAAGGTACAAAAGGAAATATATTTTCTCTCCGAGGAAGAATTTAATATAA ATTCTCCAAAACAGCTGGGTAAAATATTATTTGAAAAGTTGGATCTGCCTGTCATAAAAAAGACTAAAACGGGATATTCC ACTAATGCAGATGTATTGGAAAGATTACATGGTAAACATCCTGTAATTGAAAAAATAATCTATTATAGACAGCTTACTAA ATTATATTCCACATATATTGAAGGATTAAAAGGAGTAATAGAGGAAGATGGTAAGATTCATTCTAATTTTAATCAAACAG TAACTACTACAGGGAGACTTTCAAGTACCGAACCCAATCTTCAAAATATACCTATAAAATATGAGATGGGAAAAGAAATA AGAAAAATATTCATACCAGATAATAGGGATTGTGTTATACTCTCGGCAGATTACTCGCAAATAGAACTTAGGGTGCTTGC CCATATATCAGGGGATGAAAATTTAATAAATGCATTTATAAACCACAATGATATTCACACTAAAACTGCATCAGAGGTAT TTAATGTACCTTTGGGAGAAGTAACATCTACACAGAGAAGTAATGCAAAAGCCGTAAATTTTGGTATAGTATATGGTATT GGTGATTTTAGCTTAGCAAGGAATTTAAATATACCCAGAAAAGAAGCAAAATCTTATATAGATGCTTATTTTGAAAAATA TCCTAAAGTGAAGTTGTACATGAATGATATAGTAAAGCAGGCCGAAAAGAATTTTTATGTTACCACCATTTTAAATAGGA GAAGGTTTATACCGGAGATAAAATCTTCTAATAAAATAATAAAAGCTCTAGGAGAAAGGTTTGCCATGAATACTCCCATT CAAGGAAGTGCAGCGGATATTATAAAAATAGCTATGGTAAATGTTTTTAATAGATTAAAAGATAATAATTTTAAAAGCAA GATAATACTTCAGGTTCACGATGAACTGGTATTAAATGTGTATAAAGATGAACTAAAAGATGTAAAAGACATTGTAAAAG AGGAAATGGAAAATGTGTTTAAGCTAAAGGTTCCTCTTGAAGTGGATATAAGTATAGGGGATAATTGGTATCAAGTTAAA TAA Protein sequence : MSREKLLILDGHSLMNRAFYALPDLTNSEGTHTNAVYGFINMLLKMKKEIEPSHIVCTFDRSAPTFRHDKYSEYKAGRKR MPPELSEQFPIVKEILELLSINIFEIDGFEADDLMGTLSVFAEKKGMEVYIVTGDRDALQLATDSVKIVITKKGITQKEI YDRNKIIDDYGVTPTEFIDVKGLMGDASDNIPGVPGIGEKTALKLIKEYKSIENVLCNIDNIKGKKVQENLKNYMEQAVF SKKLATIVTDVPIELDLQSIESKEQYNAEGLRKLFEKLQFKSLMDKIPKVEEQDKIEVEDFQVECEVIDTLNKVHNFIDS LEAEDMKNKLLYINFKVVDENSYAKNYIDKIFINIGEKNFEIHIKEIYDENKIKAVETAKMLFENSSLSKVSYDVKVPCS ILHRMGIKLLGIEFDIKIAAYLMDPARTNYELPDIIKEYLNIEISEEREDCFIKETLLFSRLYSTLKKKISDSSMDKLLY EVEQPLTFVLASMECEGFKVDKDKLTEMEEKFKIEIDKVQKEIYFLSEEEFNINSPKQLGKILFEKLDLPVIKKTKTGYS TNADVLERLHGKHPVIEKIIYYRQLTKLYSTYIEGLKGVIEEDGKIHSNFNQTVTTTGRLSSTEPNLQNIPIKYEMGKEI RKIFIPDNRDCVILSADYSQIELRVLAHISGDENLINAFINHNDIHTKTASEVFNVPLGEVTSTQRSNAKAVNFGIVYGI GDFSLARNLNIPRKEAKSYIDAYFEKYPKVKLYMNDIVKQAEKNFYVTTILNRRRFIPEIKSSNKIIKALGERFAMNTPI QGSAADIIKIAMVNVFNRLKDNNFKSKIILQVHDELVLNVYKDELKDVKDIVKEEMENVFKLKVPLEVDISIGDNWYQVK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| polA | YP_281523.1 | DNA polymerase I | Not tested | Not named | Protein | 2e-168 | 44 |
