Gene Information

Name : CKL_0404 (CKL_0404)
Accession : YP_001393806.1
Strain : Clostridium kluyveri DSM 555
Genome accession: NC_009706
Putative virulence/resistance : Resistance
Product : transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG3682
EC number : -
Position : 373641 - 374015 bp
Length : 375 bp
Strand : +
Note : -

DNA sequence :
TTGAGGAAAGTAGTTGCAATCTCTGATGCGGAACTAGAAATTATGAAAATAATATGGAAAAGCCCTAATATAACAGCAAA
TAAAATTATTGAAAAACTTAAAGGTAAAACTGAATGGAAACCTAATACCATAAAAACATTAATAAATAGATTACTTAATA
AAGGGGCTATTGATTTTCAGAAGGAAGGAAAAGAATACTACTATTATAACTTGATTAATGAAGAGGAGTACAAAATTTCA
GAGAGTAAGTCTTTTTTAAATAAAATATTTAATGGATCCTTGAATTTGATGTTAATGAACTTTATAAAAACTAAGAACCT
GTCAGAAAAAGATATTGAAGAATTGAAAAAAATTTTAAATAATGCCCATAAATAA

Protein sequence :
MRKVVAISDAELEIMKIIWKSPNITANKIIEKLKGKTEWKPNTIKTLINRLLNKGAIDFQKEGKEYYYYNLINEEEYKIS
ESKSFLNKIFNGSLNLMLMNFIKTKNLSEKDIEELKKILNNAHK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
mecI YP_005754043.1 methicillin resistance regulatory protein MecI Not tested Type-XI SCCmec Protein 7e-15 46
mecI BAA82218.1 methicillin resistance protein MecI Not tested Type-II SCCmec Protein 1e-16 45
mecI NP_370567.1 methicillin resistance regulatory protein Not tested Type-II SCCmec Protein 4e-16 45
mecI NP_373280.1 methicillin resistance regulatory protein Not tested Type-II SCCmec Protein 2e-16 45
mecI YP_190060.1 methicillin-resistance regulatory protein MecI Not tested Type-II SCCmec Protein 2e-16 45
mecI YP_039517.1 methicillin resistance regulatory protein MecI Not tested Type-II SCCmec Protein 6e-14 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CKL_0404 YP_001393806.1 transcriptional regulator CP001581.1.gene771.p Protein 7e-24 53
CKL_0404 YP_001393806.1 transcriptional regulator AM180355.1.gene595.p Protein 2e-22 48
CKL_0404 YP_001393806.1 transcriptional regulator FR823292.1.gene6.p01 Protein 2e-15 46
CKL_0404 YP_001393806.1 transcriptional regulator NC_009782.5560220.p0 Protein 1e-16 45
CKL_0404 YP_001393806.1 transcriptional regulator NC_002758.1120003.p0 Protein 1e-16 45
CKL_0404 YP_001393806.1 transcriptional regulator NC_002745.1122814.p0 Protein 6e-17 45
CKL_0404 YP_001393806.1 transcriptional regulator NC_002952.2861158.p0 Protein 2e-14 44