Gene Information

Name : CKL_0039 (CKL_0039)
Accession : YP_001393466.1
Strain : Clostridium kluyveri DSM 555
Genome accession: NC_009706
Putative virulence/resistance : Resistance
Product : transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 39739 - 40428 bp
Length : 690 bp
Strand : +
Note : -

DNA sequence : 
ATGAGAAAGATTTTAATAATTGAAGATGATTTAAGTATAGCAGAACTTCAAAAGGATTATCTTGAATTAGAAGGATTCGA
AGTTACCATATGTACAGAAGGAGTAAAAGGACTAAATACGTTAAATAATAATAAATTTGATTTATTGATTCTAGATATAA
TGCTTCCTAAAATTAATGGTTATAGTATTTTGCGTAGTATACAAGATAAGAAGGACATTCCTGTACTTTTAGTTTCTGCT
AAAAAAGAGGAAATTGATAAAATTAAGGGATTCACTTTAGGAGCAGATGATTATATTACAAAGCCTTTTAGTCCTGGTGA
ACTAGTGGCAAGGGTTAAATCACATATTCAAAATTATGAAAGAATAAAAAGTAAATTTAATTTAAAGCATAATAAATTAA
TAATAAGAGGACTAGAAATACTAAAGGATTCCAGACAGGTTTTTGTAAATGGCAAGGAAATTACTTTGGCCCAAAAAGAG
TTTGATATTTTACTTTATATGGCGGAAAATCCCAACAGAGTATTCAATAGAGAAGAACTTTTTGAAAAAATATGGGGTCT
TGGCTCTATGGGAGATAATGCCACAGTTACAGTACATATAAGAAGGATACGTGAAAAGATAGAACCTTATCCGTCTAAGC
CTCAATACATAGAAACAGTGTGGGGGGCAGGTTACAGGCTTAGAGTTTAA

Protein sequence : 
MRKILIIEDDLSIAELQKDYLELEGFEVTICTEGVKGLNTLNNNKFDLLILDIMLPKINGYSILRSIQDKKDIPVLLVSA
KKEEIDKIKGFTLGADDYITKPFSPGELVARVKSHIQNYERIKSKFNLKHNKLIIRGLEILKDSRQVFVNGKEITLAQKE
FDILLYMAENPNRVFNREELFEKIWGLGSMGDNATVTVHIRRIREKIEPYPSKPQYIETVWGAGYRLRV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSU05_0907 YP_001198273.1 NisR Not tested 89K Protein 2e-26 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CKL_0039 YP_001393466.1 transcriptional regulator EU250284.1.orf4.gene Protein 4e-43 46
CKL_0039 YP_001393466.1 transcriptional regulator AM180355.1.gene1830. Protein 1e-42 44
CKL_0039 YP_001393466.1 transcriptional regulator AF130997.1.orf0.gene Protein 2e-38 43
CKL_0039 YP_001393466.1 transcriptional regulator AF155139.2.orf0.gene Protein 1e-44 42
CKL_0039 YP_001393466.1 transcriptional regulator AF162694.1.orf4.gene Protein 2e-40 42
CKL_0039 YP_001393466.1 transcriptional regulator NC_014475.1.orf0.gen Protein 5e-40 41
CKL_0039 YP_001393466.1 transcriptional regulator NC_005054.2598277.p0 Protein 5e-40 41