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Name : capD (CKL_3177) Accession : YP_001396556.1 Strain : Clostridium kluyveri DSM 555 Genome accession: NC_009706 Putative virulence/resistance : Virulence Product : protein CapD Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1086 EC number : - Position : 3242997 - 3244835 bp Length : 1839 bp Strand : - Note : predicted capsular polysaccharide biosynthesis protein DNA sequence : ATGCAGAAAGACAAAAAACTTATAGTGTATGACATATTTTTTCTCATAGCTTCTTTATATTTTGCTTTGTTACTTAGGTT TGAATTTAATGTACCATCGGAATATATGATATTTTTTAAATTGTCTGTTGTTCCTGTGGTCATAGTGACCTTGATTTGCA ATAAATTTTTTAATCTATATAACAATATATGGAAATATGCATCTGTGGAAGAGTTAATTTCTATAGTGTATTCTGTATCT CTATCTAACATTATTTTCATAATTTACAGTTACTTCGTGAATTATAAGATTCTGGAAAATAGGTATTATAGATTTCCCTA TACAGTACATATAATTCTCTGGATACTGTCTGTATTGGCATTGGGCGGAATAAGATTTACATATAGACTTTCTGGAGATA AAAAGGAAGAAAATTGTACAAAAAGAAGGCATAAAAATCTCCTCATAATTGGAGCAGGAGATGCCGCTGCCATGCTTATA AAAGAAATAAAAAAACATACAAATTTCAATTATAATATAATAGGTCTCATAGATGATGACAAATCTAAAAGGGGAAAACT TATAAAGGGTATAGAAGTTTTAGGGGGAAGAAATGAAATAATAGAAGTATGTAAAAATAGGCAAATAGAAGAGATAATAA TTGCAATGCCTTCTGCTGAACTCCATACAAAAAGAGAAATCATAAACATATGTAAAAATACAAAGTGCAAGCTAAAAACC TTACCGGGTATATATGAAATGATAGATGGAAATATAAATATTACAAAACTTAGAGATGTAAATATAGAAGATTTGCTTGG AAGAGAAGAGGTTAAATTAAATACTCAGAATATAAGCAAATATATAAAAAATAAAATTATAATGGTTACAGGGGGAGGCG GCTCTATAGGATCTGAATTGTGCAGACAGATAGCCAAATTTCAGCCGAAACAATTACTTATATTAGATATATATGAAAAT AATGTATATGATCTTGAGATGGAATTAAACTATAATTATATTGATTTAAATAAGAAAATAATTATCGCATCTATAAGAGA CGGCGGCAGATTAAAAGATGTATTTAGGAAATATACCCCCCAGGTGGTTTTTCATGCAGCCGCTCATAAGCATGTTCCTC TTATGGAAGGTAATCCTCAAGAAGCAGTAAAGAACAATATAATTGGGACTTATGAGGTTTTAAAATGCTGTGATGAATTT AAAGTAGAGAAATTTGTACAGATAAGTACGGATAAAGCAGTGAATCCTACTAATGTTATGGGGGCTACAAAAAGGTTTTG TGAAATAATGGTGCAGGCTTTTAATGAAGTCAGTAAAACTGAATATGTGGCTGTGAGATTTGGGAATGTACTGGGGAGTA ATGGTTCTGTAATCCCATTATTTAAAAGGCAAATAGCCCATGGAGGACCTGTTACAGTAACTCATCCTGAAATAAATAGA TTTTTTATGACAATTCCAGAAGCGGCTCAATTGGTAATTCAGGCAGGTGCTATAGCTGCCGGAGGAGAAATTTTTGTACT TGATATGGGAAAACCTGTAAAAATAGTGGACTTAGCTAGAGATCTTATAACTTTGTCAGGATATGAACCGGATATGGACA TAAAAATAGAATATACAGGTCTGAGACCGGGGGAGAAGCTGTATGAAGAATTACTTATGAATGAAGTAGCATTGACTTCT ACAGAGCATGATAAAATATTTATAGAAAAACCTGCTAAGATAGATATGAATTTTATAGAAAAATCTATTGGTGAATTTAA AGAAGTGTTAGATCAGGATAAAGAGCAGATAATTCAGCTTATAGAAAAAAAAGTTCCTACTTATAAGAGAAAAAAATAA Protein sequence : MQKDKKLIVYDIFFLIASLYFALLLRFEFNVPSEYMIFFKLSVVPVVIVTLICNKFFNLYNNIWKYASVEELISIVYSVS LSNIIFIIYSYFVNYKILENRYYRFPYTVHIILWILSVLALGGIRFTYRLSGDKKEENCTKRRHKNLLIIGAGDAAAMLI KEIKKHTNFNYNIIGLIDDDKSKRGKLIKGIEVLGGRNEIIEVCKNRQIEEIIIAMPSAELHTKREIINICKNTKCKLKT LPGIYEMIDGNINITKLRDVNIEDLLGREEVKLNTQNISKYIKNKIIMVTGGGGSIGSELCRQIAKFQPKQLLILDIYEN NVYDLEMELNYNYIDLNKKIIIASIRDGGRLKDVFRKYTPQVVFHAAAHKHVPLMEGNPQEAVKNNIIGTYEVLKCCDEF KVEKFVQISTDKAVNPTNVMGATKRFCEIMVQAFNEVSKTEYVAVRFGNVLGSNGSVIPLFKRQIAHGGPVTVTHPEINR FFMTIPEAAQLVIQAGAIAAGGEIFVLDMGKPVKIVDLARDLITLSGYEPDMDIKIEYTGLRPGEKLYEELLMNEVALTS TEHDKIFIEKPAKIDMNFIEKSIGEFKEVLDQDKEQIIQLIEKKVPTYKRKK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SSP0063 | YP_300153.1 | capsular polysaccharide biosynthesis protein | Not tested | SCC15305cap | Protein | 1e-95 | 47 |
| cap1D | AAA64643.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 2e-89 | 47 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| capD | YP_001396556.1 | protein CapD | VFG1300 | Protein | 7e-90 | 45 |
