Gene Information

Name : CKL_2350 (CKL_2350)
Accession : YP_001395733.1
Strain : Clostridium kluyveri DSM 555
Genome accession: NC_009706
Putative virulence/resistance : Resistance
Product : transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 2411217 - 2411900 bp
Length : 684 bp
Strand : -
Note : -

DNA sequence : 
ATGAATAAAACTGTTTTAATGGTAGATGATGAGGAAAGAATGAGACTTCTTATAGAAGCATATTTAAAAAGAGAGGGTTT
GAAAGTGCTTTTAGCGGAAAATGGAGAGGAAGCACTTAGAAAATTTAAAGAAAATCATGTGGATTTAGTGGTACTTGATA
TAATGATGCCTTTGATGGATGGCTGGACTGTATGCAGGGAACTTAGAAAGATTTCAAATGTGCCTATAATTATGCTTACA
GCCAGAGGGGAGGATGAAGATCAGCTTTTGGGGTTTCAACTTGGAACAGACAGCTATGTAACAAAGCCTGTAAGTCCCAA
AATTTTAGTGGCTAAAATAAAAGCCCTTTTAAGACGGACTTATTATGATGAAATTAATCAGGTTAAAGACAATACCTATG
ACGGACTTTTTATAAATGAAGAGGGCCATGAAGTAAAAATAGATGGAGAAAATATATATCTTTCTCCAAAAGAATTTGAG
TTTCTATGCTATTTAATTAAGAATAAGGATATAGTTTTAAGTAGGGAAAAAATTTTGGATGCCATATGGGGCATAGATTA
CTATGGAGATTTAAGAACAGTAGATACCCATGTAAAAAGACTGAGAGAAAAGTTAGGTGTTAAATCTTATTTAATAACAA
CTGTCAGGGGTGTAGGTTATAAATTTGAGGTAAAGAAGGAATGA

Protein sequence : 
MNKTVLMVDDEERMRLLIEAYLKREGLKVLLAENGEEALRKFKENHVDLVVLDIMMPLMDGWTVCRELRKISNVPIIMLT
ARGEDEDQLLGFQLGTDSYVTKPVSPKILVAKIKALLRRTYYDEINQVKDNTYDGLFINEEGHEVKIDGENIYLSPKEFE
FLCYLIKNKDIVLSREKILDAIWGIDYYGDLRTVDTHVKRLREKLGVKSYLITTVRGVGYKFEVKKE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
vanRB YP_008394254.1 DNA-binding response regulator VanRB Not tested Not named Protein 6e-31 41
vanRB NP_815956.1 DNA-binding response regulator VanRB Not tested Not named Protein 8e-30 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CKL_2350 YP_001395733.1 transcriptional regulator NC_003923.1003749.p0 Protein 2e-38 44
CKL_2350 YP_001395733.1 transcriptional regulator NC_002952.2859905.p0 Protein 1e-38 43
CKL_2350 YP_001395733.1 transcriptional regulator NC_002745.1124361.p0 Protein 2e-38 43
CKL_2350 YP_001395733.1 transcriptional regulator NC_009782.5559369.p0 Protein 2e-38 43
CKL_2350 YP_001395733.1 transcriptional regulator NC_002951.3237708.p0 Protein 2e-38 43
CKL_2350 YP_001395733.1 transcriptional regulator NC_002758.1121668.p0 Protein 2e-38 43
CKL_2350 YP_001395733.1 transcriptional regulator NC_007622.3794472.p0 Protein 1e-38 43
CKL_2350 YP_001395733.1 transcriptional regulator NC_009641.5332272.p0 Protein 2e-38 43
CKL_2350 YP_001395733.1 transcriptional regulator NC_013450.8614421.p0 Protein 2e-38 43
CKL_2350 YP_001395733.1 transcriptional regulator NC_007793.3914279.p0 Protein 2e-38 43
CKL_2350 YP_001395733.1 transcriptional regulator AF310956.2.orf0.gene Protein 3e-31 41
CKL_2350 YP_001395733.1 transcriptional regulator AE016830.1.gene2255. Protein 3e-30 41
CKL_2350 YP_001395733.1 transcriptional regulator U35369.1.gene1.p01 Protein 3e-30 41
CKL_2350 YP_001395733.1 transcriptional regulator AF155139.2.orf0.gene Protein 2e-33 41
CKL_2350 YP_001395733.1 transcriptional regulator NC_012469.1.7686381. Protein 2e-35 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CKL_2350 YP_001395733.1 transcriptional regulator VFG1386 Protein 3e-29 42