Gene Information

Name : CKL_2236 (CKL_2236)
Accession : YP_001395619.1
Strain : Clostridium kluyveri DSM 555
Genome accession: NC_009706
Putative virulence/resistance : Resistance
Product : transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG3682
EC number : -
Position : 2281267 - 2281653 bp
Length : 387 bp
Strand : -
Note : -

DNA sequence :
ATGTTGAGTAAAACACCAAAAATATCTGATTCAGAATGGGAGATAATGAAAGTATTATGGAAAAAATCACCCCTTACTTC
TAGCGAAATAATTGAAATTTTAAAAGAATATATTTCATGGAATCCAAAGACTATTCATACTCTCATTAGTAGACTAGTAA
AAAAGGATGCCATTGAAGTGAAAAAAGATACACCTTTTTATTTATATTATCCTAAGGTGTCTGAGGAGGAATGTAGAAAA
ACAGAAACAAAATCTTTTGTCAAGAAGGTTTATAACGGCTCAATTCATCTATTAATTTCTAATTTTATAAAAAACGAAAA
ATTATCAGAGGAGGAGATAGAGGAATTGAGGAAAATACTAGATGAAAAAGATAGCAGAAGGAGATGA

Protein sequence :
MLSKTPKISDSEWEIMKVLWKKSPLTSSEIIEILKEYISWNPKTIHTLISRLVKKDAIEVKKDTPFYLYYPKVSEEECRK
TETKSFVKKVYNGSIHLLISNFIKNEKLSEEEIEELRKILDEKDSRRR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
mecI YP_039517.1 methicillin resistance regulatory protein MecI Not tested Type-II SCCmec Protein 3e-16 43
mecI NP_370567.1 methicillin resistance regulatory protein Not tested Type-II SCCmec Protein 6e-16 43
mecI NP_373280.1 methicillin resistance regulatory protein Not tested Type-II SCCmec Protein 3e-16 43
mecI YP_190060.1 methicillin-resistance regulatory protein MecI Not tested Type-II SCCmec Protein 3e-16 43
mecI BAA82218.1 methicillin resistance protein MecI Not tested Type-II SCCmec Protein 2e-16 43
mecI YP_005754043.1 methicillin resistance regulatory protein MecI Not tested Type-XI SCCmec Protein 2e-15 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CKL_2236 YP_001395619.1 transcriptional regulator CP001581.1.gene771.p Protein 1e-24 48
CKL_2236 YP_001395619.1 transcriptional regulator NC_002952.2861158.p0 Protein 9e-17 43
CKL_2236 YP_001395619.1 transcriptional regulator NC_002745.1122814.p0 Protein 1e-16 43
CKL_2236 YP_001395619.1 transcriptional regulator NC_009782.5560220.p0 Protein 2e-16 43
CKL_2236 YP_001395619.1 transcriptional regulator NC_002758.1120003.p0 Protein 2e-16 43
CKL_2236 YP_001395619.1 transcriptional regulator AM180355.1.gene595.p Protein 2e-18 43
CKL_2236 YP_001395619.1 transcriptional regulator FR823292.1.gene6.p01 Protein 6e-16 42