Gene Information

Name : ribD (CKL_2169)
Accession : YP_001395552.1
Strain : Clostridium kluyveri DSM 555
Genome accession: NC_009706
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0117
EC number : -
Position : 2205873 - 2206982 bp
Length : 1110 bp
Strand : -
Note : riboflavin biosynthesis protein

DNA sequence :
ATGAATTATGACAATAAAGATGAACATTATATGGAAATTGCTTTAGAGCTGGCATCAAAGGGAGAAGGTTTTGTGAATCC
AAATCCACAGGTGGGAGCCCTTGTAGTAAAAGAAGGTAACATAGTAGGAAGAGGTTATCACAAATTTTATGGAGGACCTC
ATGCAGAGGTATATGCATTAAAAGAAGCAGGTGATAAAGCTGCAGGCGGGCAGATATACGTGACTTTGGAGCCTTGTTCT
CATTACGGCAAAACTCCACCCTGTGTAGAAGCTATAGTAAGAGCAGGAATAAAAAAAGTAGTGGTTGCATTAAAGGATCC
TAATCCACTAGTTTCAGGTAGAGGCATAGAGTTTTTAAGGAATAAGGGAATAGAAGTGGTTACAGGCGTTTTAGAAAAAG
AAGCCTTAAATATAAATGAAATATTTATAAAATATATCAGTGATAAGCTTCCTTTTGTAATATTGAAATCTGCAGTAACT
TTAGATGGTAAAATAGCAACTGTTACAGGACAGTCAAAGTGGATAACCTGTGAAGAATCCAGAAATTTTGTACATCACAT
AAGAAATAGGGTTATGGCAATTGCAGTGGGGATAGGTACCATACTTTCGGATAATCCACTTTTAACCACAAGACTTGAGA
AAAAATGTAAAAGTCCTATAGCTGTGGTTTTAGATTCTAAGTTAAGAATACCTCTGGATTGTAAGATTTTTGATACACTT
AAATATAGGAAAATCATAATAGCTTGTACAGAGGGATATGATGAAGATAAAAAGTATGAAATTGAGAAAATGGGAGTGGA
TGTAATTATCTGTCCTAAAGATGAATCTGGTCATGTGAATCTAAAGATTCTAATAGAAAAGTTAGGAAATATTGGTATAG
ATAGTTTGTTTATAGAGGGAGGGGGCTCACTTAATTTTTCTGCTTTAAGTTCAGGAATTGTAGATAAAGTTATTTATTTT
ATAGCCCCTAAAATAATAGGTGGATTAGAGGCCAAAACTTCTGTAGAAGGAAAAGGTATTGAAGATTTAAATAAAGCCGT
TAAATTAAAAAATATTAGCTATTTAAAATCAGGAGAAGATATGATGATTCAAGGATATGTAGAAAAGTAA

Protein sequence :
MNYDNKDEHYMEIALELASKGEGFVNPNPQVGALVVKEGNIVGRGYHKFYGGPHAEVYALKEAGDKAAGGQIYVTLEPCS
HYGKTPPCVEAIVRAGIKKVVVALKDPNPLVSGRGIEFLRNKGIEVVTGVLEKEALNINEIFIKYISDKLPFVILKSAVT
LDGKIATVTGQSKWITCEESRNFVHHIRNRVMAIAVGIGTILSDNPLLTTRLEKKCKSPIAVVLDSKLRIPLDCKIFDTL
KYRKIIIACTEGYDEDKKYEIEKMGVDVIICPKDESGHVNLKILIEKLGNIGIDSLFIEGGGSLNFSALSSGIVDKVIYF
IAPKIIGGLEAKTSVEGKGIEDLNKAVKLKNISYLKSGEDMMIQGYVEK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00289 YP_008207754.1 Pyrimidine deaminase Not tested AbaR25 Protein 2e-45 41
BJAB0868_00293 YP_008211619.1 Pyrimidine deaminase Not tested AbaR26 Protein 2e-45 41