Gene Information

Name : CKL_2146 (CKL_2146)
Accession : YP_001395529.1
Strain : Clostridium kluyveri DSM 555
Genome accession: NC_009706
Putative virulence/resistance : Virulence
Product : transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 2185736 - 2186422 bp
Length : 687 bp
Strand : -
Note : -

DNA sequence : 
ATGGCCTGTAAAAAAATTCTTATTGTTGAAGATGAAATAAAAATAGCCAGATTTGTTCAGCTGGAACTTGAACATGAAGG
GTATATGGTTGATCAGACTGGAGATGGGAGAGTGGGATTGGAAAAAGCCTTAAAAGGAGGCTATGACCTTATAATACTTG
ATGTTATGCTTCCCTCCCTCAATGGAATGGAAGTACTTAGAAGACTCAGGCAAATCTCGGAAATTCCCGTTATCATGCTT
ACTGCAAAGGATGAGATTATGGATAAGGTTATGGGACTTGATATAGGTGCAGAGGATTATATGACAAAACCCTTTGCTAT
AGAGGAACTTCTTGCAAGAATTAGGGTGGTGTTTAAACATAAAAGCAATAATAATGTAAAAGTTAATAATATTATTAACG
CAGGTAGTCTGCAAATGGATATTGGCAGACATATTGTTACATATGAAAATTCAGGAATAGATTTAACAAAAAAGGAATTT
GATCTTTTAAAATATTTAATGGTAAATAAAGATATTGCACTTTCCAGAGAAAATATCCTAGAAAAAGTCTGGGGATATGA
TTATTTAGGGGATACAAATATAGTAGATGTGTATATTCGTTATTTAAGAAGTAAAATTGATGATAAATTCAACAAAAAGT
ATATATATACCATTCGTGGATTGGGGTATCAATTTAGGTATGAATAA

Protein sequence : 
MACKKILIVEDEIKIARFVQLELEHEGYMVDQTGDGRVGLEKALKGGYDLIILDVMLPSLNGMEVLRRLRQISEIPVIML
TAKDEIMDKVMGLDIGAEDYMTKPFAIEELLARIRVVFKHKSNNNVKVNNIINAGSLQMDIGRHIVTYENSGIDLTKKEF
DLLKYLMVNKDIALSRENILEKVWGYDYLGDTNIVDVYIRYLRSKIDDKFNKKYIYTIRGLGYQFRYE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 1e-42 45
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 8e-42 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CKL_2146 YP_001395529.1 transcriptional regulator NC_003923.1003417.p0 Protein 4e-44 51
CKL_2146 YP_001395529.1 transcriptional regulator NC_013450.8614146.p0 Protein 4e-44 51
CKL_2146 YP_001395529.1 transcriptional regulator NC_002951.3238224.p0 Protein 4e-44 51
CKL_2146 YP_001395529.1 transcriptional regulator AE015929.1.gene1106. Protein 4e-42 51
CKL_2146 YP_001395529.1 transcriptional regulator NC_007793.3914065.p0 Protein 4e-44 51
CKL_2146 YP_001395529.1 transcriptional regulator NC_002758.1121390.p0 Protein 4e-44 51
CKL_2146 YP_001395529.1 transcriptional regulator NC_010079.5776364.p0 Protein 4e-44 51
CKL_2146 YP_001395529.1 transcriptional regulator NC_002952.2859858.p0 Protein 4e-44 51
CKL_2146 YP_001395529.1 transcriptional regulator NC_007622.3794948.p0 Protein 4e-44 51
CKL_2146 YP_001395529.1 transcriptional regulator HE999704.1.gene1528. Protein 7e-46 51
CKL_2146 YP_001395529.1 transcriptional regulator BAC0308 Protein 2e-39 46
CKL_2146 YP_001395529.1 transcriptional regulator BAC0125 Protein 1e-40 45
CKL_2146 YP_001395529.1 transcriptional regulator BAC0083 Protein 2e-41 45
CKL_2146 YP_001395529.1 transcriptional regulator AE016830.1.gene1681. Protein 8e-44 44
CKL_2146 YP_001395529.1 transcriptional regulator BAC0197 Protein 1e-40 44
CKL_2146 YP_001395529.1 transcriptional regulator HE999704.1.gene2815. Protein 2e-40 44
CKL_2146 YP_001395529.1 transcriptional regulator NC_012469.1.7686381. Protein 8e-39 41
CKL_2146 YP_001395529.1 transcriptional regulator AF155139.2.orf0.gene Protein 2e-32 41
CKL_2146 YP_001395529.1 transcriptional regulator NC_012469.1.7685629. Protein 1e-36 41
CKL_2146 YP_001395529.1 transcriptional regulator BAC0638 Protein 4e-36 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CKL_2146 YP_001395529.1 transcriptional regulator VFG0596 Protein 4e-43 45