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Name : clpC (CKL_0195) Accession : YP_001393599.1 Strain : Clostridium kluyveri DSM 555 Genome accession: NC_009706 Putative virulence/resistance : Virulence Product : protein ClpC Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 183456 - 185894 bp Length : 2439 bp Strand : + Note : predicted ATP-dependent Clp protease, ATP-binding subunit DNA sequence : ATGATGTTTGGAAGATTTACAGAAAGAGCACAAAAGGTATTAATTTATGCTCAAGAAGAGGCACAAGCACTCCAACATGG TTATGTGGGTACAGAGCATATACTTTTGGGAGTATTGAAAGAGGATGGAATAGCTAAGAACTTTTTAAATAACATGAATA TTACTATAGAAACAGTAAGAAGTTTTATAGAAGAGTATGAAGGCAGAGGAGAGATTGATTTATACAATAAGGAAATACCT CTTACTCCGAGAACAAAAAGACTTTTGGAGTTGAGCTTATTTGAAGCTAGAAATTTAAATCACAACTATATTAGTCCAGA ACACATTCTGCTTGCGTTGATTAGAGAGGCAGAAGGGGTTGCGTTTACTATTTTAAATAATTTAGGTGCTGATTTTAATA AATTAAGAAAACAGCTTATAGATTCTCTTTCAGGAGAACAATCTGTTAGTTCAAATAATTCTAAAAAAGAAAATGGAGAG CCTACTCCAACCTTGGATCAATTTGGCAGAGACTTAACTGATATGGCCAGGGAGGGAAAATTGGATCCAGTTATAGGTAG AGAAAAAGAAACTCAGAGAGTTTTGGAAATATTAAGCAGAAGAACTAAAAACAATCCTTGTCTTATAGGAGATCCAGGGG TAGGTAAGACAGCCATAGCAGAAGGATTGGCAGAAAAAATAGTGGCAGCCAATATACCTGAACTTTTAAAAGGAAAAAGA GTAGTTACTTTGGATCTTTCTTCAATGATAGCAGGTTCCAAATACAGGGGCGAATTTGAAGAAAGACTTAAAAAAGTTAT GGAAGAGATAAGGAAATCAGGGAATGTAATATTATTTATAGATGAAATTCATACCATAATAGGAGCTGGAGCTGCAGAAG GAGCTATAGATGCTTCTAACATATTAAAGCCGGCTTTGGCTAGAGGAGAAATACAATGTATAGGAGCAACCACTATAGAT GAATATAGGAAGTATATAGAAAAAGATGCTGCCCTTGAGAGAAGATTTCAGCCTATATTAGTAGGAGAACCTACTAAAGA AGAAGCAGTCTTGATATTGAAAGGTTTAAGAGATAAATATGAAGCCCATCACAGAGTGAAAATAACGGACGAAGCTATTG AGGCTGCAGTAAATTTGTCTGATAGATATATTACAGATAGATATTTACCGGATAAGGCTATTGACCTTATTGATGAAGCG GCTGCTAAAGTAAGAATACAAAATTTGATTGCTCCGCCGGATTTAAAGAATTTAGAAGTTGAATTGGAAAAAGCAACTAA AGAAAAAGAAGACTCCATTAGATTACAAGATTTTGAAAAGGCTGCTAAGTTAAGAGATATAGAAAAAGAATTGAAGGATA AGTTAGAAGGCTTAAAAACTAACTGGAAGACTAAAAAAGAAGTATCTACATTATTAGTAGGAGAAGAAAAAATTGCTTCT GTAGTGTCACAGTGGACTAATGTACCTGTGGAAAAATTAACCGAAAAAGAATTACAGAGATTACTAAAATTAGAAGACAT TCTTCATAAAAGGGTGATAGGTCAGGATGAAGCAGTTAAATCTATAGCAAGGGCAGTAAGAAGGTCTAGGGTTGGACTGA AGGATCCTAAAAGACCTATAGGTTCATTTATATTTTTAGGACCTACGGGGGTTGGAAAAACTGAACTATCCAAAGCACTG GCAGAGGCTATGTTTGGTGATGAAAATAATCTTATAAGGATTGATATGTCTGAATATATGGAAAAACACACCGTATCTAA ACTTATAGGATCTCCTCCAGGATATGTAGGATATGATGAGGGAGGACAGCTTACGGAAAAGGTAAGAAGAAATCCTTACT CAGTAGTACTGTTTGATGAAATCGAAAAAGCACATCCTGAGGTATTTAATATACTGCTGCAAATACTTGAGGATGGAAGA TTGACGGATGGAAAAGGAAAAACTATAAACTTTAAGAATACTATAATTATAATGACATCCAATGTAGGGGTATCTACCAT TAAAAAGCAAAAATCTATGGGATTCACTATTGTAAGTGATAATGAAAAACAAGATGAATATGATAAAATGAAAGACAATA TAATGGAAGAGTTGAAAACTTCTTTTAGACCTGAATTTTTAAATAGGATTGACGATATTATAGTATTCCACCAATTACAA GAAGATGATTTAAAACAGATAGTAAAGATTATGTTAAATGATGTTTCTATGAGACTTAAAGAGAAGGACATAGATATTAA TTTCAACGAAAAAGCACAAGAATTGTTAGCAAAAGAAGGATTTGATATAACTTATGGAGCCAGACCTCTTAGAAGGGCTA TAACTAAAACCGTAGAAGACAAACTTTCAGAAGAAATGTTAAAGGGTAATGTTAAAAGAGGAGATAAAGTGGAAGTAGCT GTTCAAGGAGAAGAGTTGACTTTTAATAAAGTTGATTAA Protein sequence : MMFGRFTERAQKVLIYAQEEAQALQHGYVGTEHILLGVLKEDGIAKNFLNNMNITIETVRSFIEEYEGRGEIDLYNKEIP LTPRTKRLLELSLFEARNLNHNYISPEHILLALIREAEGVAFTILNNLGADFNKLRKQLIDSLSGEQSVSSNNSKKENGE PTPTLDQFGRDLTDMAREGKLDPVIGREKETQRVLEILSRRTKNNPCLIGDPGVGKTAIAEGLAEKIVAANIPELLKGKR VVTLDLSSMIAGSKYRGEFEERLKKVMEEIRKSGNVILFIDEIHTIIGAGAAEGAIDASNILKPALARGEIQCIGATTID EYRKYIEKDAALERRFQPILVGEPTKEEAVLILKGLRDKYEAHHRVKITDEAIEAAVNLSDRYITDRYLPDKAIDLIDEA AAKVRIQNLIAPPDLKNLEVELEKATKEKEDSIRLQDFEKAAKLRDIEKELKDKLEGLKTNWKTKKEVSTLLVGEEKIAS VVSQWTNVPVEKLTEKELQRLLKLEDILHKRVIGQDEAVKSIARAVRRSRVGLKDPKRPIGSFIFLGPTGVGKTELSKAL AEAMFGDENNLIRIDMSEYMEKHTVSKLIGSPPGYVGYDEGGQLTEKVRRNPYSVVLFDEIEKAHPEVFNILLQILEDGR LTDGKGKTINFKNTIIIMTSNVGVSTIKKQKSMGFTIVSDNEKQDEYDKMKDNIMEELKTSFRPEFLNRIDDIIVFHQLQ EDDLKQIVKIMLNDVSMRLKEKDIDINFNEKAQELLAKEGFDITYGARPLRRAITKTVEDKLSEEMLKGNVKRGDKVEVA VQGEELTFNKVD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 0.0 | 57 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpC | YP_001393599.1 | protein ClpC | VFG0079 | Protein | 0.0 | 62 |
| clpC | YP_001393599.1 | protein ClpC | VFG0080 | Protein | 1e-149 | 49 |
