Gene Information

Name : kdpE (CKL_1470)
Accession : YP_001394860.1
Strain : Clostridium kluyveri DSM 555
Genome accession: NC_009706
Putative virulence/resistance : Resistance
Product : KdpE protein
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 1516395 - 1517111 bp
Length : 717 bp
Strand : +
Note : transcriptional regulator

DNA sequence : 
ATGAATAAACCATTGATTCTTGTAGTGGAAGATGATAAAGCCATCCGCAAGCTTATTACCACTACACTGGAAACACAAGG
GTATCGATATCATACTGCGGAAACGGGAGGGGCATCTATTTTAGAGGCAGTTTCTAGGCAGCCAGATATCATAATTTTGG
ATCTAGGGCTGCCTGATATGGATGGTGTTGAAATTATCAAAAAGGTGCGGACATGGTCTAATGTTCCCATTATTGTTGTC
AGCGCTCGAAGTGAGGATAGGGATAAAATTGATTCCTTGGATGCTGGTGCAGATGATTATTTAACAAAGCCTTTCAGTGT
TGAAGAGCTTTTAGCACGACTTCGGGTTAGTTTACGTCGTATTCGTTATGATAGTAAGAAGCTTCTAAAGGATGCTGCCA
TTTTTATAAATAGCGGTTTAAAAATTGACTATGAAGCCGGCTGTGTGTGGCTGGATGGAGATGAGGTACATCTTACCCCA
ATTGAATATAAATTGATTTGTCTACTTGCTAAGAATGTGGGAAAGGTTCTGACACATAATTTTATTTTACATGAAATCTG
GGGAAATTATTCAAATGATATTTCTGCTCTTCGTGTTTTTATGGCAACTCTTCGAAAAAAGATAGAAAAAGAGCCTTCAA
AGCCCAAATACATTCAAACTCACATTGGAATTGGCTATCGTATGCTGAGAGTTGTGGATGACAGCGAGATCATTTAA

Protein sequence : 
MNKPLILVVEDDKAIRKLITTTLETQGYRYHTAETGGASILEAVSRQPDIIILDLGLPDMDGVEIIKKVRTWSNVPIIVV
SARSEDRDKIDSLDAGADDYLTKPFSVEELLARLRVSLRRIRYDSKKLLKDAAIFINSGLKIDYEAGCVWLDGDEVHLTP
IEYKLICLLAKNVGKVLTHNFILHEIWGNYSNDISALRVFMATLRKKIEKEPSKPKYIQTHIGIGYRMLRVVDDSEII

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SH0031 YP_251946.1 hypothetical protein Not tested SCCmec Protein 9e-41 46
kdpE BAA82188.1 KDP operon transcriptional regulatory protein KdpE Not tested Type-II SCCmec Protein 1e-39 46
kdpE YP_039536.1 response regulator protein Not tested Type-II SCCmec Protein 1e-39 46
kdpE NP_370594.1 transcriptional regulator kdpE Not tested Type-II SCCmec Protein 1e-39 46
kdpE NP_373306.1 hypothetical protein Not tested Type-II SCCmec Protein 1e-39 46
kdeP YP_190033.1 DNA-binding response regulator KdeP Not tested Type-II SCCmec Protein 1e-39 46
EF0571 NP_814337.1 DNA-binding response regulator Not tested Not named Protein 2e-43 42
ef0091 AAM75294.1 EF0091 Not tested Not named Protein 2e-43 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
kdpE YP_001394860.1 KdpE protein HE999704.1.gene2815. Protein 9e-33 41