Gene Information

Name : phoB (CKL_1346)
Accession : YP_001394736.1
Strain : Clostridium kluyveri DSM 555
Genome accession: NC_009706
Putative virulence/resistance : Resistance
Product : protein PhoB
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 1382895 - 1383590 bp
Length : 696 bp
Strand : +
Note : predicted transcriptional regulator

DNA sequence : 
ATGTCAAAAGAAAAAATATTAATAGTAGATGATGAAGAGCATATATGTGAACTTATTAAATTCAATCTTGAAAATAATGG
ATATAAAACTATCATAGCTTCAGAAGGAATGGAAGCACTAAAAATAGCAAAGGAGGAAAGACCAAAACTTATTTTGCTTG
ATGTCATGCTTCCGGGAATGGACGGGTATGATGTATGCAAAGAAATAAGAAAAGACGAGTCGATAGCCTCTACTCCTATA
ATGATGATAACTGCCAGAGGAGAAGAATTTGACAAGGTTCTGGGATTGGAACTTGGGGCGGATGACTATATTACAAAACC
TTTTTCTGTAAGAGAATTATTGGCTAGGGTGAAAGCTATACTAAGAAGAACTGCTATAAAAACTTTAGATAAGTACTATG
TGTTTGGAGACATAAGTATAGATTTTGACAGACATGAAGTGCTTAAAAATGGAGAAAAAGTAGAATTGACACTTAAGGAA
TTTGAACTTCTCCAGATGCTTATAAAAAATAAAGGCAGAGTTATGACCAGAGATTTTCTGCTTGATAAGATATGGGGATA
TGAATATGTAGGGGAAACTAGAACTGTAGATGTTCATATAAGGCACATAAGACAGAAGATAGAAAGCTGCGATAAAAAAC
CTAAATATATTGAAACCATACGTGGAATTGGCTATAGATTTAACTGGAAAGAGTAA

Protein sequence : 
MSKEKILIVDDEEHICELIKFNLENNGYKTIIASEGMEALKIAKEERPKLILLDVMLPGMDGYDVCKEIRKDESIASTPI
MMITARGEEFDKVLGLELGADDYITKPFSVRELLARVKAILRRTAIKTLDKYYVFGDISIDFDRHEVLKNGEKVELTLKE
FELLQMLIKNKGRVMTRDFLLDKIWGYEYVGETRTVDVHIRHIRQKIESCDKKPKYIETIRGIGYRFNWKE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
vanRB YP_001698483.1 regulatory protein Not tested Not named Protein 3e-35 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
phoB YP_001394736.1 protein PhoB NC_002952.2859905.p0 Protein 5e-55 53
phoB YP_001394736.1 protein PhoB NC_002951.3237708.p0 Protein 6e-55 53
phoB YP_001394736.1 protein PhoB NC_002758.1121668.p0 Protein 6e-55 53
phoB YP_001394736.1 protein PhoB NC_009641.5332272.p0 Protein 6e-55 53
phoB YP_001394736.1 protein PhoB NC_013450.8614421.p0 Protein 6e-55 53
phoB YP_001394736.1 protein PhoB NC_007793.3914279.p0 Protein 6e-55 53
phoB YP_001394736.1 protein PhoB NC_003923.1003749.p0 Protein 6e-55 53
phoB YP_001394736.1 protein PhoB NC_007622.3794472.p0 Protein 5e-55 53
phoB YP_001394736.1 protein PhoB NC_002745.1124361.p0 Protein 6e-55 53
phoB YP_001394736.1 protein PhoB NC_009782.5559369.p0 Protein 6e-55 53
phoB YP_001394736.1 protein PhoB NC_012469.1.7685629. Protein 1e-49 51
phoB YP_001394736.1 protein PhoB HE999704.1.gene2815. Protein 8e-52 51
phoB YP_001394736.1 protein PhoB NC_012469.1.7686381. Protein 4e-51 50
phoB YP_001394736.1 protein PhoB AE016830.1.gene1681. Protein 6e-50 48
phoB YP_001394736.1 protein PhoB AE000516.2.gene3505. Protein 1e-42 44
phoB YP_001394736.1 protein PhoB NC_013450.8614146.p0 Protein 1e-39 43
phoB YP_001394736.1 protein PhoB NC_002951.3238224.p0 Protein 1e-39 43
phoB YP_001394736.1 protein PhoB NC_007793.3914065.p0 Protein 1e-39 43
phoB YP_001394736.1 protein PhoB NC_002758.1121390.p0 Protein 1e-39 43
phoB YP_001394736.1 protein PhoB NC_010079.5776364.p0 Protein 1e-39 43
phoB YP_001394736.1 protein PhoB NC_002952.2859858.p0 Protein 1e-39 43
phoB YP_001394736.1 protein PhoB NC_007622.3794948.p0 Protein 1e-39 43
phoB YP_001394736.1 protein PhoB NC_003923.1003417.p0 Protein 1e-39 43
phoB YP_001394736.1 protein PhoB HE999704.1.gene1202. Protein 3e-35 42
phoB YP_001394736.1 protein PhoB AE015929.1.gene1106. Protein 5e-35 42
phoB YP_001394736.1 protein PhoB NC_005054.2598277.p0 Protein 8e-37 41
phoB YP_001394736.1 protein PhoB NC_014475.1.orf0.gen Protein 8e-37 41
phoB YP_001394736.1 protein PhoB BAC0039 Protein 3e-35 41
phoB YP_001394736.1 protein PhoB CP001138.1.gene2239. Protein 4e-34 41
phoB YP_001394736.1 protein PhoB CP000034.1.gene2186. Protein 3e-35 41
phoB YP_001394736.1 protein PhoB NC_002695.1.916589.p Protein 2e-35 41
phoB YP_001394736.1 protein PhoB BAC0596 Protein 4e-34 41