Gene Information

Name : xerD (CKL_1241)
Accession : YP_001394631.1
Strain : Clostridium kluyveri DSM 555
Genome accession: NC_009706
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4974
EC number : -
Position : 1279237 - 1280115 bp
Length : 879 bp
Strand : +
Note : predicted tyrosine recombinase

DNA sequence :
TTGGAAAGCTTTTTACTGGGCTATGCAGAACAACTGGAAAAAAAACACATGAGTAAAAATACATTAGATGCATATATTAG
GGATATAAATAGATTCTATAATTTTATAAAGAAGAGAGAAGGAAACTTAAAAGAAGTGGAAGTAGTGTCTATAATGGCAT
ATGTACAGTATCTTCAAAAAGAAGGCAAGGCAATTTCATCCATAGTTAGAAATATAGTTTCTCTTAGAAATTTCTATAAA
TATCTAATGGTTAAGGGAGTAATAAACGAAAATCCTCTTTTGTACTATGAAATCCCTAAAGTAAAGCATAATATACCCAA
AGTTCTAACTGTAGATGAGGTAGACAAGCTTCTTGATTCTCCAGATTCTACTACTTATAAAGGAATAAGGGATAAAGCTA
TGCTTGAAATAATGTACGCTGCAGGAATGAAAGTGATGGAACTTTTAACTTTAACCATATATGATATAGATTTAAAATTT
TCATATATACGGTGTAAAAGTCTTAAGAACAAGGAAAGACTGGTACCTATAGGTTCTGTGGCAGTACAATATTTAAAAAA
TTATTTAGATATAAGACCTCAATTGAATATATACAATTTGGATACTTTGTTTTTGAATTTAAGAGGTGCAGCCATGAGTC
GCCAGGGATTTTGGAAAATTGTAAAATACTATGCAAAGGAATCTAAAATAGACAAGGATATAAATGCCTTTACTTTAAGA
CATTCTTTTGCAGTACATTTGCTTCAAAATGGTGCAGATATTAAATCTGTACAGGAACTTTTGGGACATAAAGATTTATC
CGCTACCCAGATATATTCTGCAGTACTAAAGAAGAATAAAATTGCAGAAGTATATAAAAAATCTCATCCACGGGCATAA

Protein sequence :
MESFLLGYAEQLEKKHMSKNTLDAYIRDINRFYNFIKKREGNLKEVEVVSIMAYVQYLQKEGKAISSIVRNIVSLRNFYK
YLMVKGVINENPLLYYEIPKVKHNIPKVLTVDEVDKLLDSPDSTTYKGIRDKAMLEIMYAAGMKVMELLTLTIYDIDLKF
SYIRCKSLKNKERLVPIGSVAVQYLKNYLDIRPQLNIYNLDTLFLNLRGAAMSRQGFWKIVKYYAKESKIDKDINAFTLR
HSFAVHLLQNGADIKSVQELLGHKDLSATQIYSAVLKKNKIAEVYKKSHPRA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 7e-48 41
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 7e-48 41