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Name : YpsIP31758_B0022 (YpsIP31758_B0022) Accession : YP_001393320.1 Strain : Genome accession: NC_009705 Putative virulence/resistance : Unknown Product : shufflon-specific DNA recombinase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG4974 EC number : - Position : 28990 - 30117 bp Length : 1128 bp Strand : + Note : identified by similarity to SP:P10487; match to protein family HMM PF00589 DNA sequence : ATGAAAACTAGAGTTAAAAACATACCACTCAGTAAGGCTCTAGATATCTATTTGGATAAAATTTCCTTTTTCAAAAAAGG CGGAATGCAAGAGCATTACAGAGTTAACACAATTAAAAAGTATAAATTAAGTACATTGTTAACAAATAATATAACGACTG TAGATATTGCAGAATATCGAGACGAAAGGTTAAAAACTGTAAAACCAAACGGGAAAACAATTTCTTCGAATACTGTTCGA CTTGAGTTAGCACTATTATCCCATTTATTCAAAGTTGGTATTGTAGAATGGGGCATTGCAAGAGAAAACCCAGTTTTGTT GGTTAGAAAACCGAAAGCATCTGAAGGCAGAAATAGAAGGGTGCAACCCGCAGAGCACCGCAGACTGATAAGATATGCGG ATGAACATTCAACGGGAGAATGTGCTTCAATCATTAATTTAGCCATTGAGACTGCAATGAGACAAGGTGAGATACTGTCT CTTCAGTGGGAGTACGTCGATCTTCGACAGGGTGTGGCTCACCTACCTGAGACTAAGAATGGCACCTCACGCGACGTACC CTTGTCCGCTAAGGCTCGTGAGATATTGCGTAAATGCAGTCCTAAGTCATCGGGTTCCGTGTTCAGCTATACCAGTAATG GGTTTAAGTCTGCATGGCGCTGCATTATTATAAAGTCTGGCATAAAAGACTTACATTTCCATGACTTACGACATGAGGGT GTCTCTCGGTTTGTCGAGTCAGGTAGGCTTAATATCATGGAGGTTGCTGCTATCAGCGGCCATAAATCACTTTCTATGCT CAAACGGTATACCCATTTGAAAGCAAGTGATCTGACTAAGAAACTGGATAAAAAGAAGACTCGGTATGAGAGCATTACAT CCGTAATACAACCCTATTCCGCGACAATTACCGTCGATATGAGTAGAGTTAAACTACAGTTTTGCGATTTTGATGATCTC ATCGTTGATGAAAAAAACTATGCAGACGCGATAGAAAAGGCGTCAGGCTCGTTATTAAAAATGCTTTGTCTTATGCTGAA AAATGGTGAAAAGATCCCTAATCCCAGCTTACCCCAAAATGGGCCTTTTATCATGATAGATCCATTGAATGTTAATTATG TCTGCTAG Protein sequence : MKTRVKNIPLSKALDIYLDKISFFKKGGMQEHYRVNTIKKYKLSTLLTNNITTVDIAEYRDERLKTVKPNGKTISSNTVR LELALLSHLFKVGIVEWGIARENPVLLVRKPKASEGRNRRVQPAEHRRLIRYADEHSTGECASIINLAIETAMRQGEILS LQWEYVDLRQGVAHLPETKNGTSRDVPLSAKAREILRKCSPKSSGSVFSYTSNGFKSAWRCIIIKSGIKDLHFHDLRHEG VSRFVESGRLNIMEVAAISGHKSLSMLKRYTHLKASDLTKKLDKKKTRYESITSVIQPYSATITVDMSRVKLQFCDFDDL IVDEKNYADAIEKASGSLLKMLCLMLKNGEKIPNPSLPQNGPFIMIDPLNVNYVC |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rci | NP_807850.1 | shufflon-specific DNA recombinase | Not tested | SPI-7 | Protein | 3e-79 | 52 |
| rci | AAC38070.2 | Rci | Not tested | SPI-7 | Protein | 2e-79 | 52 |
| rci | NP_458640.1 | shufflon-specific DNA recombinase | Not tested | SPI-7 | Protein | 3e-79 | 52 |
| unnamed | ABR13530.1 | site-specific recombinase | Not tested | PAGI-8 | Protein | 9e-46 | 42 |
