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Name : YpsIP31758_B0021 (YpsIP31758_B0021) Accession : YP_001393319.1 Strain : Genome accession: NC_009705 Putative virulence/resistance : Virulence Product : type IV pilus biogenesis protein PilV Function : - COG functional category : - COG ID : - EC number : - Position : 26993 - 28279 bp Length : 1287 bp Strand : + Note : similarity to shufflon proteins; identified by match to protein family HMM PF04917; match to protein family HMM TIGR02532 DNA sequence : ATGAAGCGTCTCAACTATTTGCATAAAGGCTTTGGCTTGCTGGAAGTTATTTTCTGTGTCGTATTATCACTGCTGGCGTT GGCCTCTTATTCTGAGTACTCCGCTTCTTATGCTGAGCGTCAAGTCAATGCTGCCACGGCACAACACCAGAAAAAGATTA TTCAATATACTCAAAAATATATTGAAGAAAATAATGATAGCTTATTGGCAGCAGCAACCACCACTGTTCCTGTCATCATT ACCACCGCAATGCTAAAGAATGCGAAATATATGCCTGACTACATATCAGACAAGAATGCATATCAGCAAACCTACAGCAC GTCGGTACTAAAAACAGCAGCAAACCAACTAGATGCCTTACTTGTCACGAGTGGTGGTCAAGAAATAGAAAATAAAAACC TTATTCAAATCGCAAACACACTGGGTATTTCAGGTGGTTACATCAAAACTGATGCACCTACTATTGCCAAAGGCGCTTAT GGCCAATGGAACCTTCCATTATCGACATTTAAACTTGGGAGTAATGCTGGCCATCTTGCGACAGCATTCTTTTATGTTAA TGGTAAATTAGATAATGACTATCTCTACCGCTCAAAGGTTAACGGCCATCCCGAACTCCAAAGAATGAATGCCGCAATTG ATATGAACTCAAATAATATCGACAACGCTGGCACCTTTGATGGTGTGGAAGCCAAACTGAGTGGGAACGCAGATATTAAG GGCAGTCTAAACGCAGGAAACACCACGATCACAGGGAACACCACCACATCGGGCGAAACATACACTGGCGGCTGGTTCAG AACAACCGGAGACGGCGGCATCTACTTCCAAAAGTTCGGTGGCGGTTGGAACATGACTGATAGTGCAACCATGAGAGCAT ATGGGGACAAAAACATTGCAACGGGAGGCAGTGTTAACGTTGGCAGCAACATAACGGCAGGAGGGACGATCAGCGGTAAT AACGTTATTGGTAACACAGTCACGGCCAATGGCCGTTTACGTTCAACTGAAGCATTACAGCTTGATAAAGTCTACATCGC TGGTACTGCATGTTCACCAAATGGCCTCATAGGCCGTGATGCAGCAGGGGCCACACTGAGTTGTCAATCCGGTGTGTGGA AATCAAATGGCGGTCTTCAGCGAAATTATTGCACTTGGTATTACTTTGGCGGTGGGGGGCAACAATCAATATCATGCCCA GCGGGACAATATGTGGGAGGATTCAGCCGTTACATGGAGAATGATTGGAAGCAAACTGGTCACTTCCAGATTGAGTGCTG TTCCTAG Protein sequence : MKRLNYLHKGFGLLEVIFCVVLSLLALASYSEYSASYAERQVNAATAQHQKKIIQYTQKYIEENNDSLLAAATTTVPVII TTAMLKNAKYMPDYISDKNAYQQTYSTSVLKTAANQLDALLVTSGGQEIENKNLIQIANTLGISGGYIKTDAPTIAKGAY GQWNLPLSTFKLGSNAGHLATAFFYVNGKLDNDYLYRSKVNGHPELQRMNAAIDMNSNNIDNAGTFDGVEAKLSGNADIK GSLNAGNTTITGNTTTSGETYTGGWFRTTGDGGIYFQKFGGGWNMTDSATMRAYGDKNIATGGSVNVGSNITAGGTISGN NVIGNTVTANGRLRSTEALQLDKVYIAGTACSPNGLIGRDAAGATLSCQSGVWKSNGGLQRNYCTWYYFGGGGQQSISCP AGQYVGGFSRYMENDWKQTGHFQIECCS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| pilV2 | AAP84203.1 | PilV2 | Virulence | PAPI-1 | Protein | 9e-46 | 42 |
| unnamed | ABR13422.1 | putative PilV | Not tested | PAGI-5 | Protein | 4e-44 | 41 |
