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Name : YpsIP31758_B0020 (YpsIP31758_B0020) Accession : YP_001393318.1 Strain : Genome accession: NC_009705 Putative virulence/resistance : Virulence Product : type IV secretion system protein PilT Function : - COG functional category : N : Cell motility COG ID : COG2805 EC number : - Position : 26018 - 26974 bp Length : 957 bp Strand : + Note : identified by match to protein family HMM PF00437 DNA sequence : TTGTTTTTTAGGTTGAGAAAAATGCTCTTAAAAGATTATGAGTTTGTTGATCTCTATATTGGCGTTGATTTTATCGACGT AAGCAACGGAGATGGCAGAAAAAGTGCACCTGAATGGCTGAAGAGTGAAATTAACCTAGTTAGAGAAAAATGCGAGAACT TAGAAAAACAGATTGGTTTTGTCGAGTTTTCTTTATTGCATGATGACGTGTTATATCGTGTCACCACAATAAATGACTTA TCGATGAACAGCATTTTTATTCTGCGTAAGTCGATGGCCGAGATCCGAGAACTCGATAGTATCAATCTTCCCGTGCCAAT TATGGAATTAATTAATACCAGAAATATGGATGGATTAATTTTAATTGCAGGCAAAATGCGAAACGGCAAGACCACGACAG CATCCTCGCTGATGAAGTACCGGCTTGAAAAATTCGGAGGGGTGGGAGTTGCAATCGAAGATCCTCCTGAAACGCGGTTA CACGGCTTACATGGAACAGGGCGTTGTCTACAAATAGCAGCATCGCGATTAAAAGGCGGCTACAAAGAACAAATTATCGT TGCGATGAGAACTGGTGCCGATCTGATGTTTATCGGTGAAATTCGTGATACAGCAACCGCTGTTGAAGCTGTGAATGCGT CAATCAATGGTCACATGATTATATCGACTATCCATGCTGGTAGCATTCAGGAAGCCATTGAGAAACTTCACTCCTTGTGT GACAAAGAAACTAAACAGGTTGTCGCCGATGGAATAAAAATCGTCATCTATCAAGAAATCATCGTTGTTCGTGAAAATGG AATTGGTGAAGTCATTGGCAAACGACTTGAGCTGAGCGCTTTTATTGTTGATGAAACAACACGATTTCTCATTCGTGATG GTGACTTGTCTGCTATTAACCAACAAGTATTCCACCAATCAACAAAACACCAGTGGGATTCGAGCGGTACAAATTAA Protein sequence : MFFRLRKMLLKDYEFVDLYIGVDFIDVSNGDGRKSAPEWLKSEINLVREKCENLEKQIGFVEFSLLHDDVLYRVTTINDL SMNSIFILRKSMAEIRELDSINLPVPIMELINTRNMDGLILIAGKMRNGKTTTASSLMKYRLEKFGGVGVAIEDPPETRL HGLHGTGRCLQIAASRLKGGYKEQIIVAMRTGADLMFIGEIRDTATAVEAVNASINGHMIISTIHAGSIQEAIEKLHSLC DKETKQVVADGIKIVIYQEIIVVRENGIGEVIGKRLELSAFIVDETTRFLIRDGDLSAINQQVFHQSTKHQWDSSGTN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| pilT2 | AAP84204.1 | PilT2 | Virulence | PAPI-1 | Protein | 3e-43 | 42 |
| unnamed | ABR13423.1 | putative PilU | Not tested | PAGI-5 | Protein | 2e-43 | 42 |
