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Name : CLI_A0024 (CLI_A0024) Accession : YP_001393028.1 Strain : Genome accession: NC_009700 Putative virulence/resistance : Virulence Product : ABC transporter CbaT Function : - COG functional category : V : Defense mechanisms COG ID : COG2274 EC number : - Position : 15148 - 17370 bp Length : 2223 bp Strand : - Note : identified by match to protein family HMM PF00005; match to protein family HMM PF00664; match to protein family HMM PF03412; match to protein family HMM TIGR01193 DNA sequence : ATGAGACAATTTTTTAACAGATACGTATGTATAAAACAACATGATCATAAAGATTGTGGTGCTGCTTGTCTTGCAACTAT ATGTAAGCAATATGGTTTAAAATATCCAATTTCAAAAATAAGAGAGGTTGCAGGAACAGATAAGGAAGGTACCAGCGCTC TTGGAGTAATTAAGGCTGCAGAGGAGCTTGGATTTACTGCTAAAGGAGTTAAGGCAAGTAAACCAGAGGATTTATTTACT GAAATACCTCTTCCATGTATAGCCCATGTAGTTATAGATAAAACTATGCTACATTATGTAGTTATTCATAAGATAACAGA GAAGGAAATTATAATTGCAGATCCTGGTAGAGGAATTATCAAGTATAATCCTCAGGAGTTTTTTGAAATTTGGACAGGAA TACTTCTTATTATGACTCCTACTGTAAAGTTTGAAAAGGGAAATAAGGAAAAGGGATTATTTCAAAGGTTTTTTAAACTT ATAAAACCTCAAAAAAAGCTTTTAGTAAATATATTTTTATCCTCTATTATATTCACTATATTAGGAATAATAGGAGCTTT TTATTTTAAGTTTATTTTAGATGATATTATACCAAATAATTTAAACAAAAGTCTTCATATGATATCTATTGGAATAATAG TTTTAACTCTTTTTAAAGTATTACTGGGTGCCTTTAGAACACAGCTCTTAATTTATTTAGGACAAAATATGGACATACCT TTAATGCTAGGTTATTACGAGCATGTTATAAATCTTCCAATGAATTTCTTTGGAACTCGTGAGGTAGGAGAGATTATATC AAGATTTAATGATGCATCTAAAATAAGAGATGCTATATCAGGGGCTACCCTAACTATGATGATAGATAGTCTTATGGTTA TTATAGGCGGAATATTTTTATATACTTCAAATAGTTTATTATTTGGTATAACTGTGATTCCAATTGTATTATACATAATT ATTGTCTGGGCTTTTAATAAACCTTTAGAAGAAGTAAATAGAAGTGTTATGGAAGACAATGCAAAGCTTACTTCATATCT TGTAGAATCATTAAATGGAGTAGAAACTATAAAAGCATTTAATGCTGAAGGTGAAGTTAATTTAGAGACAGAAAAGAGAT TTATATTCCTTATAAAAAGTGTGTTTAAAAATGGTTTTATAAATAACCTTCACGGTTCGATAAAGGGAAGTGTTAAATCT GTATTTGGTGTAGTTATCCTTTGGGTTGGAACACATCAAGTTTTAAAGGGCTCTATGTCTATAGGACAGCTTATAAGCTT TAATGCATTACTTGCATACTTTTTAGATCCTATAGAAAATATAATAAATCTTCAACCACAACTTCAAACTGCAGTTGTAG CCGGAGAAAGACTTGGAGAAATACTTGATTTAGAGATTGAAAAAAGTATGGATGAAGAGAAGAAGATTAAACCTCAATCC TTATTAGGAAATATAGAATTTAAAGATGTAGATTTTAGATATGGAACTAGAAAGCTCATACTTAAGGATATAAGTATGAA TATAAAGCCTGGTGAAAAGATTGCTCTAGTTGGGGAAAGTGGCTCAGGAAAAACTACTTTAGCAAAGCTTTTAATGAATT TTTATCAATGTGAAAAAGGTGAAATATTAATAAATACATATAATATAAAGGATATAAATATAGAAACCTTAAGAGATAAA ATAGCTTATATATCTCAAGAAACTTTTTTATTTAATGGAACTATAAAGGAAAACTTATCTTTAGGGAATCCCTATATTAC ATATGAAGAGATTATAGAAGCATGTAAAAGAGCTCAAATACATGACTTTATAAATTCTCTTCCATTAAGATATAACACAT TAGTAGAGGAGAATGGGTCTAACTTTTCAGGTGGTCAAAAACAAAGGTTATCAATAGCTAGGGCAATACTTAAAAAACCT GAAATATTAATAATGGATGAGGCTACAAGTAGCTTAGATTCCATAACAGAGCGAGCTATAGAAAATACTATGAATGAATT TAGTGAAGGTATAACAACTATTATAATAGCCCATAGATTAAGTACTATTAGAAGATGCAATACCATATATGTTTTAGATA AAGGTGAGATTATAGAGAAAGGATCTCATGATGAATTAATAAATATTAAAGGTAGGTATTATAACCTTTGGAAGGATCAA CTTCCCTTTGATGATGTTAATCTTGAAGTTGCTGCATCAAAGGATAAGGGAGGGATTAAGTAA Protein sequence : MRQFFNRYVCIKQHDHKDCGAACLATICKQYGLKYPISKIREVAGTDKEGTSALGVIKAAEELGFTAKGVKASKPEDLFT EIPLPCIAHVVIDKTMLHYVVIHKITEKEIIIADPGRGIIKYNPQEFFEIWTGILLIMTPTVKFEKGNKEKGLFQRFFKL IKPQKKLLVNIFLSSIIFTILGIIGAFYFKFILDDIIPNNLNKSLHMISIGIIVLTLFKVLLGAFRTQLLIYLGQNMDIP LMLGYYEHVINLPMNFFGTREVGEIISRFNDASKIRDAISGATLTMMIDSLMVIIGGIFLYTSNSLLFGITVIPIVLYII IVWAFNKPLEEVNRSVMEDNAKLTSYLVESLNGVETIKAFNAEGEVNLETEKRFIFLIKSVFKNGFINNLHGSIKGSVKS VFGVVILWVGTHQVLKGSMSIGQLISFNALLAYFLDPIENIINLQPQLQTAVVAGERLGEILDLEIEKSMDEEKKIKPQS LLGNIEFKDVDFRYGTRKLILKDISMNIKPGEKIALVGESGSGKTTLAKLLMNFYQCEKGEILINTYNIKDINIETLRDK IAYISQETFLFNGTIKENLSLGNPYITYEEIIEACKRAQIHDFINSLPLRYNTLVEENGSNFSGGQKQRLSIARAILKKP EILIMDEATSSLDSITERAIENTMNEFSEGITTIIIAHRLSTIRRCNTIYVLDKGEIIEKGSHDELINIKGRYYNLWKDQ LPFDDVNLEVAASKDKGGIK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| CPR_1082 | YP_698404.1 | bacteriocin ABC transporter ATP-binding/permease | Virulence | Not named | Protein | 0.0 | 77 |
| CPR_0658 | YP_697985.1 | lactococcin g processing and transport ATP-binding protein | Virulence | Not named | Protein | 2e-138 | 41 |
