Gene Information

Name : CLI_0969 (CLI_0969)
Accession : YP_001390237.1
Strain : Clostridium botulinum Langeland
Genome accession: NC_009699
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1012271 - 1012954 bp
Length : 684 bp
Strand : +
Note : identified by match to protein family HMM PF00005; match to protein family HMM PF02463

DNA sequence : 
GTGGAAATATTAAAAATAGAGCATTTGTCTAAGATATATGGAAGTGGAGACACTGCAATAAAGGCACTTAATGATGTATC
CTTTTCTGTAGAAAAAGGAGAATTTGTTGCAATTATTGGACCGTCAGGATCGGGAAAGTCAACTTTACTACATATGATTG
GTGGTGTGGATAGACCAACAAGCGGCAAAGTTTTAGTAGATAATACTGATATTTATAATTTGAATGAAACACAACTGGCT
ATATTTAGACGTAGACAGATAGGTCTTATATATCAATTTTATAATCTTATTCCAGTACTTAATGTGGAAGAAAATATTAC
ACTTCCATTGCTACTAGATGGTCATAAGGTGGATAAAAAGAAGCTTGATGAAATTATAAAAATACTTAATTTAGAAAAAA
GATTAAATCATTTACCTAACCAGCTTTCTGGTGGACAACAGCAGAGAGTGTCCATAGGAAGGGCAATTATAAGCAATCCA
GCTATAATGCTAGCAGATGAACCTACTGGAAATTTAGACAGTAAAAATAGTAATGAAATAATTGAACTGTTAAAAATGTT
TAATAAAACATTTAACCAAACTCTTATAATAATCACTCATGATGAACGTATTGCATTACAGGCGGATAGAATTATAGCTA
TAGAAGATGGTAAAGTTAAGAAGGACGAGGTGATTCGTCCATGA

Protein sequence : 
MEILKIEHLSKIYGSGDTAIKALNDVSFSVEKGEFVAIIGPSGSGKSTLLHMIGGVDRPTSGKVLVDNTDIYNLNETQLA
IFRRRQIGLIYQFYNLIPVLNVEENITLPLLLDGHKVDKKKLDEIIKILNLEKRLNHLPNQLSGGQQQRVSIGRAIISNP
AIMLADEPTGNLDSKNSNEIIELLKMFNKTFNQTLIIITHDERIALQADRIIAIEDGKVKKDEVIRP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-29 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-30 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 4e-30 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-30 42
unnamed AAP55232.1 unknown Not tested SaPIbov2 Protein 2e-30 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CLI_0969 YP_001390237.1 ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 1e-55 60
CLI_0969 YP_001390237.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 8e-56 59
CLI_0969 YP_001390237.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 2e-35 43
CLI_0969 YP_001390237.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 4e-36 42
CLI_0969 YP_001390237.1 ABC transporter ATP-binding protein NC_012469.1.7685735. Protein 7e-36 41