Gene Information

Name : CLI_0652 (CLI_0652)
Accession : YP_001389936.1
Strain : Clostridium botulinum Langeland
Genome accession: NC_009699
Putative virulence/resistance : Virulence
Product : DNA binding protein
Function : -
COG functional category : K : Transcription
COG ID : COG1476
EC number : -
Position : 683071 - 683283 bp
Length : 213 bp
Strand : +
Note : identified by match to protein family HMM PF01381

DNA sequence :
GTGAAAAATAGGGTAAAAGAATTACGAGCTGCATCCAATATGACACAACAGCAGCTTGCTGATTTAGTTTCAGTTTCCTC
AAGAACCATTATTTCACTTGAAAAAGGACAATACAATCCCTCAATTATGTTGGCATATAAAATAGCGCGTGTTTTTAACA
CAACTATTGAAGAGTTATATTGTTTAAAGGAGAATTTGGAAAATGAATATTAA

Protein sequence :
MKNRVKELRAASNMTQQQLADLVSVSSRTIISLEKGQYNPSIMLAYKIARVFNTTIEELYCLKENLENEY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0524 NP_814301.1 Cro/CI family transcriptional regulator Not tested Not named Protein 6e-05 42
ef0042 AAM75247.1 EF0042 Virulence Not named Protein 4e-05 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CLI_0652 YP_001389936.1 DNA binding protein VFG2175 Protein 2e-05 42
CLI_0652 YP_001389936.1 DNA binding protein VFG2168 Protein 2e-05 42